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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LX295282.1 emblrelpat JP 2016514480-A/80: METHODS AND COM... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
LX295401.1 emblrelpat JP 2016514480-A/199: METHODS AND CO... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
LX295415.1 emblrelpat JP 2016514480-A/213: METHODS AND CO... 11938 bp synthetic construct QT-ELE-00-002 68 bp View
LX295426.1 emblrelpat JP 2016514480-A/224: METHODS AND CO... 3336 bp synthetic construct QT-ELE-00-002 68 bp View
LY290932.1 emblrelpat KR 1020160065932-A/2: SOYBEAN TRANS... 1828 bp synthetic construct QT-ELE-00-002 68 bp View
LY336285.1 emblrelpat KR 1020160111915-A/15: PRODUCTION O... 37281 bp synthetic construct QT-ELE-00-002 68 bp View
LY336286.1 emblrelpat KR 1020160111915-A/16: PRODUCTION O... 33672 bp synthetic construct QT-ELE-00-002 68 bp View
LY336287.1 emblrelpat KR 1020160111915-A/17: PRODUCTION O... 34011 bp synthetic construct QT-ELE-00-002 68 bp View
LY336288.1 emblrelpat KR 1020160111915-A/18: PRODUCTION O... 33668 bp synthetic construct QT-ELE-00-002 68 bp View
LY336289.1 emblrelpat KR 1020160111915-A/19: PRODUCTION O... 35570 bp synthetic construct QT-ELE-00-002 68 bp View
LY336290.1 emblrelpat KR 1020160111915-A/20: PRODUCTION O... 36453 bp synthetic construct QT-ELE-00-002 68 bp View
LY336291.1 emblrelpat KR 1020160111915-A/21: PRODUCTION O... 33639 bp synthetic construct QT-ELE-00-002 68 bp View
LY336292.1 emblrelpat KR 1020160111915-A/22: PRODUCTION O... 35500 bp synthetic construct QT-ELE-00-002 68 bp View
LY336293.1 emblrelpat KR 1020160111915-A/23: PRODUCTION O... 36498 bp synthetic construct QT-ELE-00-002 68 bp View
LY336294.1 emblrelpat KR 1020160111915-A/24: PRODUCTION O... 36553 bp synthetic construct QT-ELE-00-002 68 bp View
LY336295.1 emblrelpat KR 1020160111915-A/25: PRODUCTION O... 36658 bp synthetic construct QT-ELE-00-002 68 bp View
LY336296.1 emblrelpat KR 1020160111915-A/26: PRODUCTION O... 36494 bp synthetic construct QT-ELE-00-002 68 bp View
LY336297.1 emblrelpat KR 1020160111915-A/27: PRODUCTION O... 37334 bp synthetic construct QT-ELE-00-002 68 bp View
LY336298.1 emblrelpat KR 1020160111915-A/28: PRODUCTION O... 37330 bp synthetic construct QT-ELE-00-002 68 bp View
LY336299.1 emblrelpat KR 1020160111915-A/29: PRODUCTION O... 38465 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.