European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LV539399.1 emblrelpat JP 2016537985-A/16: PRODUCTION OF O... 36453 bp synthetic construct QT-ELE-00-002 68 bp View
LV539400.1 emblrelpat JP 2016537985-A/17: PRODUCTION OF O... 33639 bp synthetic construct QT-ELE-00-002 68 bp View
LV539401.1 emblrelpat JP 2016537985-A/18: PRODUCTION OF O... 35500 bp synthetic construct QT-ELE-00-002 68 bp View
LV539402.1 emblrelpat JP 2016537985-A/19: PRODUCTION OF O... 36498 bp synthetic construct QT-ELE-00-002 68 bp View
LV539403.1 emblrelpat JP 2016537985-A/20: PRODUCTION OF O... 36553 bp synthetic construct QT-ELE-00-002 68 bp View
LV539404.1 emblrelpat JP 2016537985-A/21: PRODUCTION OF O... 36658 bp synthetic construct QT-ELE-00-002 68 bp View
LV539405.1 emblrelpat JP 2016537985-A/22: PRODUCTION OF O... 36494 bp synthetic construct QT-ELE-00-002 68 bp View
LV539406.1 emblrelpat JP 2016537985-A/23: PRODUCTION OF O... 37334 bp synthetic construct QT-ELE-00-002 68 bp View
LV539407.1 emblrelpat JP 2016537985-A/24: PRODUCTION OF O... 37330 bp synthetic construct QT-ELE-00-002 68 bp View
LV539408.1 emblrelpat JP 2016537985-A/25: PRODUCTION OF O... 38465 bp synthetic construct QT-ELE-00-002 68 bp View
LV539409.1 emblrelpat JP 2016537985-A/26: PRODUCTION OF O... 36595 bp synthetic construct QT-ELE-00-002 68 bp View
LV539410.1 emblrelpat JP 2016537985-A/27: PRODUCTION OF O... 36880 bp synthetic construct QT-ELE-00-002 68 bp View
LV539411.1 emblrelpat JP 2016537985-A/28: PRODUCTION OF O... 37478 bp synthetic construct QT-ELE-00-002 68 bp View
LV539412.1 emblrelpat JP 2016537985-A/29: PRODUCTION OF O... 35035 bp synthetic construct QT-ELE-00-002 68 bp View
LV539413.1 emblrelpat JP 2016537985-A/30: PRODUCTION OF O... 33995 bp synthetic construct QT-ELE-00-002 68 bp View
LV539414.1 emblrelpat JP 2016537985-A/31: PRODUCTION OF O... 38249 bp synthetic construct QT-ELE-00-002 68 bp View
LV539415.1 emblrelpat JP 2016537985-A/32: PRODUCTION OF O... 36011 bp synthetic construct QT-ELE-00-002 68 bp View
LV539416.1 emblrelpat JP 2016537985-A/33: PRODUCTION OF O... 38299 bp synthetic construct QT-ELE-00-002 68 bp View
LV539417.1 emblrelpat JP 2016537985-A/34: PRODUCTION OF O... 36021 bp synthetic construct QT-ELE-00-002 68 bp View
LX252620.1 emblrelpat JP 2017512070-A/16: RNA production ... 8610 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.