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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ978876.1 emblrelpat Sequence 60 from Patent EP2571994. 37935 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978877.1 emblrelpat Sequence 61 from Patent EP2571994. 38239 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978878.1 emblrelpat Sequence 62 from Patent EP2571994. 34850 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978879.1 emblrelpat Sequence 63 from Patent EP2571994. 35154 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978880.1 emblrelpat Sequence 64 from Patent EP2571994. 38074 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978881.1 emblrelpat Sequence 65 from Patent EP2571994. 36718 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978882.1 emblrelpat Sequence 66 from Patent EP2571994. 36517 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978883.1 emblrelpat Sequence 67 from Patent EP2571994. 36590 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978884.1 emblrelpat Sequence 68 from Patent EP2571994. 35499 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978885.1 emblrelpat Sequence 69 from Patent EP2571994. 22042 bp synthetic construct QT-ELE-00-002 68 bp View
LQ978886.1 emblrelpat Sequence 70 from Patent EP2571994. 23255 bp synthetic construct QT-ELE-00-002 68 bp View
LQ986677.1 emblrelpat Sequence 33 from Patent EP2573183. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
LQ986677.1 emblrelpat Sequence 33 from Patent EP2573183. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
LQ986680.1 emblrelpat Sequence 36 from Patent EP2573183. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
LQ986680.1 emblrelpat Sequence 36 from Patent EP2573183. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
LV539394.1 emblrelpat JP 2016537985-A/11: PRODUCTION OF O... 37281 bp synthetic construct QT-ELE-00-002 68 bp View
LV539395.1 emblrelpat JP 2016537985-A/12: PRODUCTION OF O... 33672 bp synthetic construct QT-ELE-00-002 68 bp View
LV539396.1 emblrelpat JP 2016537985-A/13: PRODUCTION OF O... 34011 bp synthetic construct QT-ELE-00-002 68 bp View
LV539397.1 emblrelpat JP 2016537985-A/14: PRODUCTION OF O... 33668 bp synthetic construct QT-ELE-00-002 68 bp View
LV539398.1 emblrelpat JP 2016537985-A/15: PRODUCTION OF O... 35570 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.