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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ682933.1 emblrelpat Sequence 24 from Patent EP3073817. 36553 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682934.1 emblrelpat Sequence 25 from Patent EP3073817. 36658 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682935.1 emblrelpat Sequence 26 from Patent EP3073817. 36494 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682936.1 emblrelpat Sequence 27 from Patent EP3073817. 37334 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682937.1 emblrelpat Sequence 28 from Patent EP3073817. 37330 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682938.1 emblrelpat Sequence 29 from Patent EP3073817. 38465 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682939.1 emblrelpat Sequence 30 from Patent EP3073817. 36595 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682940.1 emblrelpat Sequence 31 from Patent EP3073817. 36880 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682941.1 emblrelpat Sequence 32 from Patent EP3073817. 37478 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682942.1 emblrelpat Sequence 33 from Patent EP3073817. 35035 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682943.1 emblrelpat Sequence 34 from Patent EP3073817. 33995 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682944.1 emblrelpat Sequence 35 from Patent EP3073817. 38249 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682945.1 emblrelpat Sequence 36 from Patent EP3073817. 36011 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682946.1 emblrelpat Sequence 37 from Patent EP3073817. 38299 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682947.1 emblrelpat Sequence 38 from Patent EP3073817. 36021 bp synthetic construct QT-ELE-00-002 68 bp View
LQ839358.1 emblrelpat Sequence 35 from Patent EP3354739. 33034 bp synthetic construct QT-ELE-00-002 68 bp View
LQ839359.1 emblrelpat Sequence 36 from Patent EP3354739. 33003 bp synthetic construct QT-ELE-00-002 68 bp View
LQ839360.1 emblrelpat Sequence 37 from Patent EP3354739. 33951 bp synthetic construct QT-ELE-00-002 68 bp View
LQ839362.1 emblrelpat Sequence 39 from Patent EP3354739. 38811 bp synthetic construct QT-ELE-00-002 68 bp View
LQ839363.1 emblrelpat Sequence 40 from Patent EP3354739. 35302 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.