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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LF647877.1 emblrelpat JP 2016136958-A/64: Lowering Satura... 14103 bp synthetic construct QT-ELE-00-002 68 bp View
LF647878.1 emblrelpat JP 2016136958-A/65: Lowering Satura... 13812 bp synthetic construct QT-ELE-00-002 68 bp View
LF647924.1 emblrelpat JP 2016144456-A/45: Lowering Satura... 13227 bp synthetic construct QT-ELE-00-002 68 bp View
LF647931.1 emblrelpat JP 2016144456-A/52: Lowering Satura... 18713 bp synthetic construct QT-ELE-00-002 68 bp View
LF647932.1 emblrelpat JP 2016144456-A/53: Lowering Satura... 14524 bp synthetic construct QT-ELE-00-002 68 bp View
LF647933.1 emblrelpat JP 2016144456-A/54: Lowering Satura... 18422 bp synthetic construct QT-ELE-00-002 68 bp View
LF647934.1 emblrelpat JP 2016144456-A/55: Lowering Satura... 14233 bp synthetic construct QT-ELE-00-002 68 bp View
LF647935.1 emblrelpat JP 2016144456-A/56: Lowering Satura... 14575 bp synthetic construct QT-ELE-00-002 68 bp View
LF647936.1 emblrelpat JP 2016144456-A/57: Lowering Satura... 14602 bp synthetic construct QT-ELE-00-002 68 bp View
LF647937.1 emblrelpat JP 2016144456-A/58: Lowering Satura... 10915 bp synthetic construct QT-ELE-00-002 68 bp View
LF647943.1 emblrelpat JP 2016144456-A/64: Lowering Satura... 14103 bp synthetic construct QT-ELE-00-002 68 bp View
LF647944.1 emblrelpat JP 2016144456-A/65: Lowering Satura... 13812 bp synthetic construct QT-ELE-00-002 68 bp View
LF938431.1 emblrelpat JP 2016187343-A/11: Herbicide toler... 4076 bp synthetic construct QT-ELE-00-002 68 bp View
LF945183.1 emblrelpat JP 2016531559-A/2: Soybean Transfor... 1828 bp synthetic construct QT-ELE-00-002 68 bp View
LF948615.1 emblrelpat JP 2016198097-A/1: AAD-12 EVENT 416... 10212 bp synthetic construct QT-ELE-00-002 68 bp View
LG025702.1 emblrelpat KR 1020150006469-A/185: METHODS AND... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
LG025822.1 emblrelpat KR 1020150006469-A/326: METHODS AND... 6661 bp synthetic construct QT-ELE-00-002 68 bp View
LG025923.1 emblrelpat KR 1020150006469-A/427: METHODS AND... 7390 bp synthetic construct QT-ELE-00-002 68 bp View
LG047901.1 emblrelpat KR 1020150027233-A/3: INSECT RESIST... 12381 bp synthetic construct QT-ELE-00-002 68 bp View
LG047912.1 emblrelpat KR 1020150027233-A/14: INSECT RESIS... 15170 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.