European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
HW505079.1 emblrelpat JP 2014502494-A/9: SOYBEAN EVENT SY... 7914 bp synthetic construct QT-ELE-00-002 68 bp View
HW505079.1 emblrelpat JP 2014502494-A/9: SOYBEAN EVENT SY... 7914 bp synthetic construct QT-ELE-00-002 68 bp View
HW505079.1 emblrelpat JP 2014502494-A/9: SOYBEAN EVENT SY... 7914 bp synthetic construct QT-ELE-00-002 68 bp View
HW505079.1 emblrelpat JP 2014502494-A/9: SOYBEAN EVENT SY... 7914 bp synthetic construct QT-ELE-00-002 68 bp View
HW505080.1 emblrelpat JP 2014502494-A/10: SOYBEAN EVENT S... 9206 bp synthetic construct QT-ELE-00-002 68 bp View
HW505080.1 emblrelpat JP 2014502494-A/10: SOYBEAN EVENT S... 9206 bp synthetic construct QT-ELE-00-002 68 bp View
HW505080.1 emblrelpat JP 2014502494-A/10: SOYBEAN EVENT S... 9206 bp synthetic construct QT-ELE-00-002 68 bp View
HW505080.1 emblrelpat JP 2014502494-A/10: SOYBEAN EVENT S... 9206 bp synthetic construct QT-ELE-00-002 68 bp View
HW531737.1 emblrelpat JP 2014507932-A/13: STACKED HERBICI... 10256 bp synthetic construct QT-ELE-00-002 68 bp View
HW531751.1 emblrelpat JP 2014507932-A/27: STACKED HERBICI... 13659 bp synthetic construct QT-ELE-00-002 68 bp View
HW531752.1 emblrelpat JP 2014507932-A/28: STACKED HERBICI... 14619 bp synthetic construct QT-ELE-00-002 68 bp View
HW531753.1 emblrelpat JP 2014507932-A/29: STACKED HERBICI... 15294 bp synthetic construct QT-ELE-00-002 68 bp View
HW652021.1 emblrelpat JP 2014523251-A/18: STACKED HERBICI... 12011 bp synthetic construct QT-ELE-00-002 68 bp View
HW652024.1 emblrelpat JP 2014523251-A/21: STACKED HERBICI... 10256 bp synthetic construct QT-ELE-00-002 68 bp View
HW660945.1 emblrelpat JP 2014522661-A/3: SOYBEAN EVENT pD... 12381 bp synthetic construct QT-ELE-00-002 68 bp View
HW660956.1 emblrelpat JP 2014522661-A/14: SOYBEAN EVENT p... 15294 bp synthetic construct QT-ELE-00-002 68 bp View
HW660965.1 emblrelpat JP 2014523749-A/3: INSECT RESISTANT... 12381 bp synthetic construct QT-ELE-00-002 68 bp View
HW660976.1 emblrelpat JP 2014523749-A/14: INSECT RESISTAN... 15294 bp synthetic construct QT-ELE-00-002 68 bp View
HW660982.1 emblrelpat JP 2014523750-A/6: Production of DH... 33003 bp synthetic construct QT-ELE-00-002 68 bp View
HW661002.1 emblrelpat JP 2014523750-A/26: Production of D... 38794 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.