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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 100 amplicons

Restrict to taxon(s):


Record ID Database Record description Record length Taxon Method Amplicon size Match details
BD014494.1 emblrelpat JP 2001136983-A/36: Transgenic corn... 2318 bp synthetic construct QT-CON-00-008 133 bp View
BD170161.1 emblrelpat WO 2002034943-A/74: Method of quant... 1071 bp synthetic construct QT-CON-00-008 133 bp View
BD295580.1 emblrelpat WO 2003027283-A/21: Nucleic acid fr... 1135 bp synthetic construct QT-CON-00-008 154 bp View
CS434496.1 emblrelpat Sequence 14 from Patent WO2006045633. 5616 bp synthetic construct QT-CON-00-008 133 bp View
DI201810.1 emblrelpat KR 1020110126306-A/50: A method for... 459 bp artificial sequences QT-CON-00-008 133 bp View
DI244062.1 emblrelpat KR 1020120107476-A/1: ELITE EVENT E... 7296 bp artificial sequences QT-CON-00-008 133 bp View
DI244072.1 emblrelpat KR 1020120107476-A/11: ELITE EVENT ... 17806 bp artificial sequences QT-CON-00-008 133 bp View
DI244072.1 emblrelpat KR 1020120107476-A/11: ELITE EVENT ... 17806 bp artificial sequences QT-CON-00-008 133 bp View
DI244145.1 emblrelpat KR 1020120107479-A/1: HERBICIDE TOL... 7296 bp artificial sequences QT-CON-00-008 133 bp View
DI244164.1 emblrelpat KR 1020120107479-A/20: HERBICIDE TO... 17806 bp artificial sequences QT-CON-00-008 133 bp View
DI244164.1 emblrelpat KR 1020120107479-A/20: HERBICIDE TO... 17806 bp artificial sequences QT-CON-00-008 133 bp View
DI389528.1 emblrelpat KR 1020140007352-A/13: STACKED HERB... 10256 bp synthetic construct QT-CON-00-008 133 bp View
DI389542.1 emblrelpat KR 1020140007352-A/27: STACKED HERB... 13659 bp synthetic construct QT-CON-00-008 133 bp View
DI404829.1 emblrelpat KR 1020140044388-A/18: STACKED HERB... 12011 bp synthetic construct QT-CON-00-008 133 bp View
DI404832.1 emblrelpat KR 1020140044388-A/21: STACKED HERB... 10256 bp synthetic construct QT-CON-00-008 133 bp View
GX183322.1 emblrelpat Sequence 74 from patent US 7709232. 1071 bp unidentified QT-CON-00-008 133 bp View
GY510979.1 emblrelpat Sequence 14 from patent US 8053636. 5616 bp unidentified QT-CON-00-008 133 bp View
HJ695405.1 emblrelpat Sequence 1 from patent US 8592650. 7296 bp unidentified QT-CON-00-008 133 bp View
HJ695415.1 emblrelpat Sequence 11 from patent US 8592650. 17806 bp unidentified QT-CON-00-008 133 bp View
HJ695415.1 emblrelpat Sequence 11 from patent US 8592650. 17806 bp unidentified QT-CON-00-008 133 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.