JRC GMO-Amplicons | EURL GMFF

Amplicon finder

1) Select detection method(s) *
*Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown*
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)
*Note: If you select methods here, records that produce amplicons with any of those methods will be removed*

3) Select database(s) *
nt	GenBank nt section (NCBI)
emblreltgn	ENA transgenic data class division (EMBL-EBI)
emblrelpat	ENA patent data class division (EMBL-EBI)
nrnl1	Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 37 amplicons

Restrict to taxon(s):

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
HW467464.1	emblrelpat	WO 2014024493-A/12: A method for pr...	118 bp	Glycine max	QL-TAX-GM-002	118 bp	View
HW467477.1	emblrelpat	WO 2014024493-A/25: A method for pr...	874 bp	synthetic construct	QL-TAX-GM-002	118 bp	View
HW467478.1	emblrelpat	WO 2014024493-A/26: A method for pr...	3572 bp	synthetic construct	QL-TAX-GM-002	118 bp	View
HZ433168.1	emblrelpat	JP 2015198652-A/7: SAMPLE PREPARATI...	725 bp	synthetic construct	QL-TAX-GM-002	118 bp	View
K00821.1	nt	Soybean lectin (Le1) gene, complete...	2152 bp	Glycine max	QL-TAX-GM-002	118 bp	View
KH534075.1	emblrelpat	Sequence 2 from patent US 9562267.	1278 bp	unidentified	QL-TAX-GM-002	118 bp	View
KH534098.1	emblrelpat	Sequence 25 from patent US 9562267.	8605 bp	unidentified	QL-TAX-GM-002	118 bp	View
MD245289.1	emblrelpat	JP 2020108358-A/13: A method for de...	3931 bp	synthetic construct	QL-TAX-GM-002	118 bp	View
NRN_AX033509	nrnl1	Sequence 17 from Patent DE19906169....	250 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_BD170162	nrnl1	Method of quantifying gene modifica...	239 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_BD170163	nrnl1	Method of quantifying gene modifica...	528 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_BD295560	nrnl1	Nucleic acid fragment for competiti...	346 bp	unidentified	QL-TAX-GM-002	139 bp	View
NRN_BD295561	nrnl1	Nucleic acid fragment for competiti...	402 bp	unidentified	QL-TAX-GM-002	139 bp	View
NRN_DD278614	nrnl1	The reagent for measuring quantity ...	128 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_DD278615	nrnl1	The reagent for measuring quantity ...	128 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_DD435966	nrnl1	Method for quantitative detection o...	528 bp	unidentified	QL-TAX-GM-002	118 bp	View
NRN_DM163293	nrnl1	A method for binding a protein to a...	1296 bp	unidentified	QL-TAX-GM-002	118 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.