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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 7034 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
OM804225.1 nt Lycium sp. clone V12L0111 Yuanguo N... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804226.1 nt Lycium sp. clone V12L0113 QH-13-08-... 1131 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804227.1 nt Lycium sp. clone V12L0048 Baitiao t... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804228.1 nt Lycium sp. clone V12L0118 HB tRNA-L... 1131 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804229.1 nt Lycium sp. clone V12L0119 QH-13-08 ... 1131 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804230.1 nt Lycium sp. clone V12L0126 Qin No.1 ... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804233.1 nt Lycium sp. clone V12L0134 Qin No.2 ... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804234.1 nt Lycium sp. clone V12L0076 B2 tRNA-L... 1131 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804235.1 nt Lycium sp. clone V12L0077 B3 tRNA-L... 1131 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804236.1 nt Lycium sp. clone V12L0066 15-1 tRNA... 1130 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804237.1 nt Lycium sp. clone V12L0047 Tianjing ... 1128 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804238.1 nt Lycium sp. clone V12L0078 B4 tRNA-L... 1130 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804239.1 nt Lycium sp. clone V12L0127 Qin No.8 ... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804240.1 nt Lycium sp. clone V12L0068 15-3 tRNA... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804242.1 nt Lycium sp. clone V12L0151 16-18-7-6... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804244.1 nt Lycium sp. clone V12L0049 Neimeneg ... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804246.1 nt Lycium barbarum clone V12L0011 Zhut... 1089 bp Lycium barbarum QL-PLN-00-007 571 bp View
OM804247.1 nt Lycium sp. clone V12L0152 5haohuang... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804248.1 nt Lycium sp. clone V12L0145 16-17-5-6... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View
OM804249.1 nt Lycium sp. clone V12L0148 16-22-8-9... 1089 bp Lycium sp. QL-PLN-00-007 571 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.