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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 2902 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ682924.1 emblrelpat Sequence 15 from Patent EP3073817. 37281 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682925.1 emblrelpat Sequence 16 from Patent EP3073817. 33672 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682925.1 emblrelpat Sequence 16 from Patent EP3073817. 33672 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682926.1 emblrelpat Sequence 17 from Patent EP3073817. 34011 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682926.1 emblrelpat Sequence 17 from Patent EP3073817. 34011 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682927.1 emblrelpat Sequence 18 from Patent EP3073817. 33668 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682927.1 emblrelpat Sequence 18 from Patent EP3073817. 33668 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682928.1 emblrelpat Sequence 19 from Patent EP3073817. 35570 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682928.1 emblrelpat Sequence 19 from Patent EP3073817. 35570 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682929.1 emblrelpat Sequence 20 from Patent EP3073817. 36453 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682929.1 emblrelpat Sequence 20 from Patent EP3073817. 36453 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682930.1 emblrelpat Sequence 21 from Patent EP3073817. 33639 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682930.1 emblrelpat Sequence 21 from Patent EP3073817. 33639 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682931.1 emblrelpat Sequence 22 from Patent EP3073817. 35500 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682931.1 emblrelpat Sequence 22 from Patent EP3073817. 35500 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682932.1 emblrelpat Sequence 23 from Patent EP3073817. 36498 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682932.1 emblrelpat Sequence 23 from Patent EP3073817. 36498 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682933.1 emblrelpat Sequence 24 from Patent EP3073817. 36553 bp synthetic construct QL-ELE-00-025 108 bp View
LQ682933.1 emblrelpat Sequence 24 from Patent EP3073817. 36553 bp synthetic construct QT-ELE-00-002 68 bp View
LQ682934.1 emblrelpat Sequence 25 from Patent EP3073817. 36658 bp synthetic construct QL-ELE-00-025 108 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.