European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 5891 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AX451740.1 emblrelpat Sequence 15 from Patent WO0238769. 2200 bp synthetic construct QL-ELE-00-017 75 bp View
AX590202.1 emblrelpat Sequence 9 from Patent WO02083888. 12789 bp synthetic construct QL-ELE-00-017 75 bp View
AX644612.1 emblrelpat Sequence 2 from Patent WO02099112. 3390 bp synthetic construct QL-ELE-00-017 75 bp View
AX743820.1 emblrelpat Sequence 1 from Patent WO03031632. 10635 bp synthetic construct QL-ELE-00-017 75 bp View
AX765918.1 emblrelpat Sequence 4 from Patent WO02097097. 5250 bp synthetic construct QL-ELE-00-017 75 bp View
AX765954.1 emblrelpat Sequence 40 from Patent WO02097097. 5247 bp synthetic construct QL-ELE-00-017 75 bp View
AX765956.1 emblrelpat Sequence 42 from Patent WO02097097. 6285 bp synthetic construct QL-ELE-00-017 75 bp View
AX765962.1 emblrelpat Sequence 48 from Patent WO02097097. 5511 bp synthetic construct QL-ELE-00-017 75 bp View
AX765964.1 emblrelpat Sequence 50 from Patent WO02097097. 6299 bp synthetic construct QL-ELE-00-017 75 bp View
AX765966.1 emblrelpat Sequence 52 from Patent WO02097097. 5715 bp synthetic construct QL-ELE-00-017 75 bp View
AX798164.1 emblrelpat Sequence 40 from Patent WO03054201. 2815 bp synthetic construct QL-ELE-00-017 75 bp View
AX798169.1 emblrelpat Sequence 45 from Patent WO03054201. 2430 bp synthetic construct QL-ELE-00-017 75 bp View
AX924540.1 emblrelpat Sequence 10 from Patent EP1352963. 1949 bp unidentified QL-ELE-00-017 75 bp View
AY141042.1 nt Binary vector pGV4945 kanamycin res... 6595 bp Binary vector pGV4945 QL-ELE-00-017 75 bp View
AY147202.1 nt Binary vector pGV4939 kanamycin res... 6643 bp Binary vector pGV4939 QL-ELE-00-017 75 bp View
AY178047.1 nt Expression vector pYPX143, complete... 15382 bp Expression vector pYPX143 QL-ELE-00-017 75 bp View
AY178047.1 nt Expression vector pYPX143, complete... 15382 bp Expression vector pYPX143 QL-ELE-00-017 75 bp View
AY178047.1 nt Expression vector pYPX143, complete... 15382 bp Expression vector pYPX143 QL-ELE-00-017 75 bp View
AY178047.1 nt Expression vector pYPX143, complete... 15382 bp Expression vector pYPX143 QL-ELE-00-017 75 bp View
AY178048.1 nt Expression vector pYPX145, complete... 16520 bp Expression vector pYPX145 QL-ELE-00-017 75 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.