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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 5891 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AX018494.1 emblrelpat Sequence 17 from Patent WO9945129. 907 bp synthetic construct QL-ELE-00-017 75 bp View
AX019188.1 emblrelpat Sequence 26 from Patent WO9941393. 900 bp synthetic construct QL-ELE-00-017 75 bp View
AX019212.1 emblrelpat Sequence 50 from Patent WO9941393. 900 bp synthetic construct QL-ELE-00-017 75 bp View
AX026717.1 emblrelpat Sequence 19 from Patent WO0039300. 470 bp synthetic construct QL-ELE-00-017 75 bp View
AX033493.1 emblrelpat Sequence 1 from Patent DE19906169. 240 bp synthetic construct QL-ELE-00-017 75 bp View
AX044092.1 emblrelpat Sequence 47 from Patent WO0066748. 309 bp Cauliflower mosaic virus QL-ELE-00-017 75 bp View
AX052539.1 emblrelpat Sequence 1 from Patent WO0071668. 12614 bp synthetic construct QL-ELE-00-017 75 bp View
AX063413.1 emblrelpat Sequence 5 from Patent WO0100833. 7599 bp synthetic construct QL-ELE-00-017 75 bp View
AX134224.1 emblrelpat Sequence 1 from Patent WO0132897. 2807 bp synthetic construct QL-ELE-00-017 75 bp View
AX151106.1 emblrelpat Sequence 2 from Patent WO0138518. 5796 bp synthetic construct QL-ELE-00-017 75 bp View
AX164073.1 emblrelpat Sequence 18 from Patent EP1118669. 189 bp synthetic construct QL-ELE-00-017 75 bp View
AX195438.1 emblrelpat Sequence 1 from Patent WO0151654. 3983 bp synthetic construct QL-ELE-00-017 75 bp View
AX275254.1 emblrelpat Sequence 3 from Patent WO0171014. 5767 bp synthetic construct QL-ELE-00-017 75 bp View
AX275255.1 emblrelpat Sequence 4 from Patent WO0171014. 14446 bp synthetic construct QL-ELE-00-017 75 bp View
AX302480.1 emblrelpat Sequence 12 from Patent WO0177350. 6309 bp synthetic construct QL-ELE-00-017 75 bp View
AX302481.1 emblrelpat Sequence 13 from Patent WO0177350. 8043 bp synthetic construct QL-ELE-00-017 75 bp View
AX302482.1 emblrelpat Sequence 14 from Patent WO0177350. 7404 bp synthetic construct QL-ELE-00-017 75 bp View
AX384399.1 emblrelpat Sequence 4 from Patent WO0214521. 10490 bp synthetic construct QL-ELE-00-017 75 bp View
AX384399.1 emblrelpat Sequence 4 from Patent WO0214521. 10490 bp synthetic construct QL-ELE-00-017 75 bp View
AX405116.1 emblrelpat Sequence 30 from Patent WO0226995. 309 bp Cauliflower mosaic virus QL-ELE-00-017 75 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.