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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 5891 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AR482081.1 emblrelpat Sequence 19 from patent US 6699984. 9335 bp unidentified QL-ELE-00-017 75 bp View
AR482088.1 emblrelpat Sequence 26 from patent US 6699984. 5897 bp unidentified QL-ELE-00-017 75 bp View
AR490568.1 emblrelpat Sequence 3 from patent US 6713259. 566 bp unidentified QL-ELE-00-017 75 bp View
AR534233.1 emblrelpat Sequence 3 from patent US 6733974. 340 bp unidentified QL-ELE-00-017 75 bp View
AR534234.1 emblrelpat Sequence 4 from patent US 6733974. 428 bp unidentified QL-ELE-00-017 75 bp View
AR575401.1 emblrelpat Sequence 3 from patent US 6770799. 5767 bp unidentified QL-ELE-00-017 75 bp View
AR575402.1 emblrelpat Sequence 4 from patent US 6770799. 14446 bp unidentified QL-ELE-00-017 75 bp View
AR576351.1 emblrelpat Sequence 17 from patent US 6774281. 907 bp unidentified QL-ELE-00-017 75 bp View
AR643978.1 emblrelpat Sequence 47 from patent US 6867293. 309 bp unidentified QL-ELE-00-017 75 bp View
AR656168.1 emblrelpat Sequence 15 from patent US 6893826. 4973 bp unidentified QL-ELE-00-017 75 bp View
AR706425.1 emblrelpat Sequence 1 from patent US 6933111. 4161 bp unidentified QL-ELE-00-017 75 bp View
AR719859.1 emblrelpat Sequence 13 from patent US 6943281. 4149 bp unidentified QL-ELE-00-017 75 bp View
AR719860.1 emblrelpat Sequence 15 from patent US 6943281. 3754 bp unidentified QL-ELE-00-017 75 bp View
AR719864.1 emblrelpat Sequence 23 from patent US 6943281. 3469 bp unidentified QL-ELE-00-017 75 bp View
AR723962.1 emblrelpat Sequence 1 from patent US 6951929. 3983 bp unidentified QL-ELE-00-017 75 bp View
AR757165.1 emblrelpat Sequence 33 from patent US 6953835. 661 bp unidentified QL-ELE-00-017 75 bp View
AR882131.1 emblrelpat Sequence 10 from patent US 7049421. 13737 bp unidentified QL-ELE-00-017 75 bp View
AR893334.1 emblrelpat Sequence 9 from patent US 7064246. 700 bp unidentified QL-ELE-00-017 75 bp View
AR899371.1 emblrelpat Sequence 2 from patent US 7071385. 5796 bp unidentified QL-ELE-00-017 75 bp View
AR987992.1 emblrelpat Sequence 10 from patent US 7119192. 835 bp unidentified QL-ELE-00-017 75 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.