European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 5891 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
AP019393.1 nt Gateway binary vector pB4GWcV DNA, ... 11772 bp Gateway binary vector pB4GWcV QL-ELE-00-017 75 bp View
AR003011.1 emblrelpat Sequence 46 from patent US 5743477. 1030 bp unidentified QL-ELE-00-017 75 bp View
AR014735.1 emblrelpat Sequence 23 from patent US 5773700. 446 bp unidentified QL-ELE-00-017 75 bp View
AR014749.1 emblrelpat Sequence 5 from patent US 5773705. 831 bp unidentified QL-ELE-00-017 75 bp View
AR022666.1 emblrelpat Sequence 16 from patent US 5792932. 1863 bp unidentified QL-ELE-00-017 75 bp View
AR029592.1 emblrelpat Sequence 9 from patent US 5859340. 1863 bp unidentified QL-ELE-00-017 75 bp View
AR078675.1 emblrelpat Sequence 5 from patent US 5962768. 7811 bp unidentified QL-ELE-00-017 75 bp View
AR082579.1 emblrelpat Sequence 3 from patent US 5973135. 439 bp unidentified QL-ELE-00-017 75 bp View
AR082581.1 emblrelpat Sequence 5 from patent US 5973135. 1722 bp unidentified QL-ELE-00-017 75 bp View
AR110594.1 emblrelpat Sequence 1 from patent US 6114608. 532 bp unidentified QL-ELE-00-017 75 bp View
AR110598.1 emblrelpat Sequence 5 from patent US 6114608. 560 bp unidentified QL-ELE-00-017 75 bp View
AR110602.1 emblrelpat Sequence 9 from patent US 6114608. 7378 bp unidentified QL-ELE-00-017 75 bp View
AR110602.1 emblrelpat Sequence 9 from patent US 6114608. 7378 bp unidentified QL-ELE-00-017 75 bp View
AR143709.1 emblrelpat Sequence 1 from patent US 6204436. 8012 bp unidentified QL-ELE-00-017 75 bp View
AR143712.1 emblrelpat Sequence 4 from patent US 6204436. 8798 bp unidentified QL-ELE-00-017 75 bp View
AR143713.1 emblrelpat Sequence 5 from patent US 6204436. 8418 bp unidentified QL-ELE-00-017 75 bp View
AR150993.1 emblrelpat Sequence 1 from patent US 6229075. 532 bp unidentified QL-ELE-00-017 75 bp View
AR150997.1 emblrelpat Sequence 5 from patent US 6229075. 560 bp unidentified QL-ELE-00-017 75 bp View
AR151001.1 emblrelpat Sequence 9 from patent US 6229075. 7378 bp unidentified QL-ELE-00-017 75 bp View
AR151001.1 emblrelpat Sequence 9 from patent US 6229075. 7378 bp unidentified QL-ELE-00-017 75 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.