European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 5891 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
A05521.1 emblrelpat pRT100 DNA sequence 711 bp synthetic construct QL-ELE-00-017 75 bp View
A17370.1 emblrelpat Artificial promoter-,polylinker- an... 793 bp synthetic construct QL-ELE-00-017 75 bp View
A17373.1 emblrelpat Artificial phosphinothricinacetyltr... 793 bp synthetic construct QL-ELE-00-017 75 bp View
A17374.1 emblrelpat Artificial phosphinothricinacetyltr... 793 bp synthetic construct QL-ELE-00-017 75 bp View
A26453.1 emblrelpat Recombinant soya beta-1,3-glucanase... 1829 bp Glycine max QL-ELE-00-017 75 bp View
A31176.1 emblrelpat phosphinothriciacetyltransferase DN... 793 bp unidentified QL-ELE-00-017 75 bp View
A31677.1 emblrelpat phosphinothriciacetyltransferase DN... 793 bp unidentified QL-ELE-00-017 75 bp View
A32909.1 emblrelpat Chimeric endochitinase gene 1863 bp Nicotiana tabacum QL-ELE-00-017 75 bp View
A40108.1 emblrelpat Sequence 16 from Patent WO9421793. 1863 bp unidentified QL-ELE-00-017 75 bp View
A41016.1 emblrelpat Sequence 3 from Patent EP0626449. 439 bp unidentified QL-ELE-00-017 75 bp View
A41018.1 emblrelpat Sequence 5 from Patent EP0626449. 1722 bp unidentified QL-ELE-00-017 75 bp View
A51131.1 emblrelpat Sequence 7 from Patent WO9615251. 2728 bp unidentified QL-ELE-00-017 75 bp View
A59870.1 emblrelpat Sequence 2 from Patent WO9706269. 1138 bp unidentified QL-ELE-00-017 75 bp View
A70078.1 emblrelpat Sequence 1 from Patent WO9812321. 899 bp Drosophila melanogaster QL-ELE-00-017 75 bp View
A78762.1 emblrelpat Sequence 23 from Patent EP0566525. 446 bp Tobacco mosaic virus QL-ELE-00-017 75 bp View
A83076.1 emblrelpat Sequence 10 from Patent WO9853083. 1949 bp unidentified QL-ELE-00-017 75 bp View
A91666.1 emblrelpat Sequence 1 from Patent WO9824920. 3159 bp unidentified QL-ELE-00-017 75 bp View
A91667.1 emblrelpat Sequence 2 from Patent WO9824920. 3030 bp unidentified QL-ELE-00-017 75 bp View
A91668.1 emblrelpat Sequence 3 from Patent WO9824920. 2656 bp unidentified QL-ELE-00-017 75 bp View
A94795.1 emblrelpat Sequence 39 from Patent WO9932630. 1138 bp unidentified QL-ELE-00-017 75 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.