European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 7569 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HC918437 nrnl1 Sequence 5 from Patent WO2010061215. 9724 bp unidentified QL-ELE-00-026 60 bp View
NRN_HC918438 nrnl1 Sequence 6 from Patent WO2010061215. 12189 bp unidentified QL-ELE-00-014 60 bp View
NRN_HC918438 nrnl1 Sequence 6 from Patent WO2010061215. 12189 bp unidentified QL-ELE-00-022 69 bp View
NRN_HC918438 nrnl1 Sequence 6 from Patent WO2010061215. 12189 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH760161 nrnl1 Sequence 581 from Patent EP2221381. 11180 bp unidentified QL-ELE-00-014 60 bp View
NRN_HH760161 nrnl1 Sequence 581 from Patent EP2221381. 11180 bp unidentified QL-ELE-00-022 69 bp View
NRN_HH760161 nrnl1 Sequence 581 from Patent EP2221381. 11180 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH820950 nrnl1 Sequence 42 from Patent WO2010099462. 1628 bp unidentified QL-ELE-00-014 60 bp View
NRN_HH820950 nrnl1 Sequence 42 from Patent WO2010099462. 1628 bp unidentified QL-ELE-00-022 69 bp View
NRN_HH820950 nrnl1 Sequence 42 from Patent WO2010099462. 1628 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH964262 nrnl1 Sequence 2 from Patent EP1606386. 1911 bp unidentified QL-ELE-00-014 60 bp View
NRN_HH964262 nrnl1 Sequence 2 from Patent EP1606386. 1911 bp unidentified QL-ELE-00-022 69 bp View
NRN_HH964262 nrnl1 Sequence 2 from Patent EP1606386. 1911 bp unidentified QL-ELE-00-026 60 bp View
NRN_HH964263 nrnl1 Sequence 3 from Patent EP1606386. 1920 bp unidentified QL-ELE-00-014 60 bp View
NRN_HH964263 nrnl1 Sequence 3 from Patent EP1606386. 1920 bp unidentified QL-ELE-00-022 69 bp View
NRN_HH964263 nrnl1 Sequence 3 from Patent EP1606386. 1920 bp unidentified QL-ELE-00-026 60 bp View
NRN_HI471084 nrnl1 Sequence 15 from Patent EP2137312. ... 7862 bp unidentified QL-ELE-00-014 60 bp View
NRN_HI471084 nrnl1 Sequence 15 from Patent EP2137312. ... 7862 bp unidentified QL-ELE-00-022 69 bp View
NRN_HI471084 nrnl1 Sequence 15 from Patent EP2137312. ... 7862 bp unidentified QL-ELE-00-026 60 bp View
NRN_HI649001 nrnl1 Sequence 56 from Patent WO201012195... 9597 bp unidentified QL-ELE-00-014 60 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.