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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HV549912 nrnl1 JP 2011527180-A/128: Influenza Viru... 3520 bp unidentified QL-ELE-00-012 82 bp View
NRN_HV571048 nrnl1 JP 2012501190-A/13: PLANT GLUTAMINE... 1868 bp unidentified QL-ELE-00-012 82 bp View
NRN_HV572463 nrnl1 JP 2012501662-A/17: MODIFICATION OF... 5908 bp unidentified QL-ELE-00-012 82 bp View
NRN_HV572463 nrnl1 JP 2012501662-A/17: MODIFICATION OF... 5908 bp unidentified QL-ELE-00-012 82 bp View
NRN_I04847 nrnl1 Sequence 3 from patent EP 0221044. 333 bp unidentified QL-ELE-00-012 82 bp View
NRN_I06170 nrnl1 Sequence 11 from patent EP 0289478.... 647 bp unidentified QL-ELE-00-012 82 bp View
NRN_I06859 nrnl1 Sequence 1 from patent EP 0332581. 4906 bp unidentified QL-ELE-00-012 82 bp View
NRN_I09342 nrnl1 Sequence 3 from Patent WO 8904868. 4583 bp unidentified QL-ELE-00-012 82 bp View
NRN_I24797 nrnl1 Sequence 30 from patent US 5545565.... 979 bp unidentified QL-ELE-00-012 82 bp View
NRN_I24798 nrnl1 Sequence 31 from patent US 5545565.... 978 bp unidentified QL-ELE-00-012 82 bp View
NRN_I28266 nrnl1 Sequence 1 from patent US 5569828. 5033 bp unidentified QL-ELE-00-012 82 bp View
NRN_I28266 nrnl1 Sequence 1 from patent US 5569828. 5033 bp unidentified QL-ELE-00-012 82 bp View
NRN_I70384 nrnl1 Sequence 2 from patent US 5679558. 5642 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078178 nrnl1 Sequence 2 from Patent WO2011034946... 20500 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078178 nrnl1 Sequence 2 from Patent WO2011034946... 20500 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078179 nrnl1 Sequence 3 from Patent WO2011034946. 22395 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078179 nrnl1 Sequence 3 from Patent WO2011034946. 22395 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078180 nrnl1 Sequence 4 from Patent WO2011034946. 22517 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078180 nrnl1 Sequence 4 from Patent WO2011034946. 22517 bp unidentified QL-ELE-00-012 82 bp View
NRN_JA078185 nrnl1 Sequence 9 from Patent WO2011034946. 18329 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.