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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HI578412 nrnl1 Sequence 28 from Patent WO2010114989. 20921 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578414 nrnl1 Sequence 30 from Patent WO2010114989. 10528 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578415 nrnl1 Sequence 31 from Patent WO2010114989. 11721 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578416 nrnl1 Sequence 32 from Patent WO2010114989. 19713 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578417 nrnl1 Sequence 33 from Patent WO2010114989. 10287 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578417 nrnl1 Sequence 33 from Patent WO2010114989. 10287 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578418 nrnl1 Sequence 34 from Patent WO2010114989. 11480 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578418 nrnl1 Sequence 34 from Patent WO2010114989. 11480 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578419 nrnl1 Sequence 35 from Patent WO2010114989. 19472 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578419 nrnl1 Sequence 35 from Patent WO2010114989. 19472 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578445 nrnl1 Sequence 61 from Patent WO2010114989. 19404 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578450 nrnl1 Sequence 66 from Patent WO2010114989. 19215 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578453 nrnl1 Sequence 69 from Patent WO2010114989. 20742 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI578455 nrnl1 Sequence 71 from Patent WO2010114989. 20553 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI654103 nrnl1 Sequence 10 from Patent EP2208788. 6714 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI968055 nrnl1 Sequence 6 from Patent WO2010138011. 4697 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI968056 nrnl1 Sequence 7 from Patent WO2010138011. 4467 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI968057 nrnl1 Sequence 8 from Patent WO2010138011. 5431 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI968058 nrnl1 Sequence 9 from Patent WO2010138011. 8172 bp unidentified QL-ELE-00-012 82 bp View
NRN_HI968060 nrnl1 Sequence 11 from Patent WO2010138011. 7942 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.