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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HB427182 nrnl1 Sequence 25 from Patent WO2009073844. 1802 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB427182 nrnl1 Sequence 25 from Patent WO2009073844. 1802 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB427183 nrnl1 Sequence 26 from Patent WO2009073844. 1200 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB427183 nrnl1 Sequence 26 from Patent WO2009073844. 1200 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB427184 nrnl1 Sequence 27 from Patent WO2009073844. 1309 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB427184 nrnl1 Sequence 27 from Patent WO2009073844. 1309 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB432196 nrnl1 Sequence 4817 from Patent WO2009073... 9769 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB432196 nrnl1 Sequence 4817 from Patent WO2009073... 9769 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB432197 nrnl1 Sequence 4818 from Patent WO2009073069. 8504 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB432197 nrnl1 Sequence 4818 from Patent WO2009073069. 8504 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB432197 nrnl1 Sequence 4818 from Patent WO2009073069. 8504 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB477460 nrnl1 Sequence 40 from Patent WO2009086229. 15263 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB485453 nrnl1 Sequence 9 from Patent WO2009087391... 7732 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB485454 nrnl1 Sequence 10 from Patent WO200908739... 4173 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB485502 nrnl1 Sequence 21 from Patent WO200908604... 6547 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB485503 nrnl1 Sequence 22 from Patent WO200908604... 3191 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB855720 nrnl1 Sequence 52 from Patent WO2009095881. 538 bp unidentified QL-ELE-00-012 82 bp View
NRN_HB999717 nrnl1 Sequence 16 from Patent WO2009103960. 11252 bp unidentified QL-ELE-00-012 82 bp View
NRN_HC008378 nrnl1 Sequence 7 from Patent WO2009111263. 3309 bp unidentified QL-ELE-00-012 82 bp View
NRN_HC008395 nrnl1 Sequence 24 from Patent WO2009111263. 5629 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.