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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GZ245905 nrnl1 Sequence 360 from patent US 8153859... 8206 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245906 nrnl1 Sequence 361 from patent US 8153859... 8602 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245908 nrnl1 Sequence 364 from patent US 8153859... 8458 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245909 nrnl1 Sequence 365 from patent US 8153859... 8386 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245910 nrnl1 Sequence 366 from patent US 8153859... 9124 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245911 nrnl1 Sequence 367 from patent US 8153859... 8791 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245912 nrnl1 Sequence 368 from patent US 8153859... 8329 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245913 nrnl1 Sequence 369 from patent US 8153859... 8206 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245914 nrnl1 Sequence 370 from patent US 8153859... 8314 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245915 nrnl1 Sequence 371 from patent US 8153859... 8137 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245916 nrnl1 Sequence 372 from patent US 8153859... 8092 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245917 nrnl1 Sequence 373 from patent US 8153859... 8602 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245918 nrnl1 Sequence 374 from patent US 8153859... 8761 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245919 nrnl1 Sequence 375 from patent US 8153859... 8674 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ251617 nrnl1 Sequence 49 from patent US 8158858. 4157 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ297039 nrnl1 Sequence 65 from patent US 8168858. 11198 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ342399 nrnl1 Sequence 66 from patent US 8188338.... 18661 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ450610 nrnl1 Sequence 33 from patent US 8232381.... 5449 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ450611 nrnl1 Sequence 34 from patent US 8232381.... 4666 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ484916 nrnl1 Sequence 1 from patent US 8257930. ... 13998 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.