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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GZ219882 nrnl1 Sequence 52 from patent US 8143476.... 11611 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ219893 nrnl1 Sequence 63 from patent US 8143476.... 12055 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ219978 nrnl1 Sequence 159 from patent US 8143476... 8654 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ219982 nrnl1 Sequence 164 from patent US 8143476... 8653 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ220036 nrnl1 Sequence 224 from patent US 8143476... 9396 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ220037 nrnl1 Sequence 225 from patent US 8143476... 11440 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ220041 nrnl1 Sequence 229 from patent US 8143476... 11111 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ220047 nrnl1 Sequence 235 from patent US 8143476... 11879 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245799 nrnl1 Sequence 238 from patent US 8153859... 8457 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245803 nrnl1 Sequence 242 from patent US 8153859... 8458 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245810 nrnl1 Sequence 249 from patent US 8153859... 9122 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245816 nrnl1 Sequence 256 from patent US 8153859... 8091 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245820 nrnl1 Sequence 260 from patent US 8153859... 8386 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245825 nrnl1 Sequence 266 from patent US 8153859... 8137 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245831 nrnl1 Sequence 273 from patent US 8153859... 8329 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245837 nrnl1 Sequence 280 from patent US 8153859... 8674 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245846 nrnl1 Sequence 289 from patent US 8153859... 8677 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245851 nrnl1 Sequence 294 from patent US 8153859... 8314 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245856 nrnl1 Sequence 300 from patent US 8153859... 8761 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ245900 nrnl1 Sequence 355 from patent US 8153859... 8791 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.