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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GY360135 nrnl1 Sequence 55 from patent US 8022274. 953 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360136 nrnl1 Sequence 56 from patent US 8022274. 1356 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360136 nrnl1 Sequence 56 from patent US 8022274. 1356 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360137 nrnl1 Sequence 57 from patent US 8022274. 1358 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360137 nrnl1 Sequence 57 from patent US 8022274. 1358 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360138 nrnl1 Sequence 58 from patent US 8022274. 1319 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360138 nrnl1 Sequence 58 from patent US 8022274. 1319 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360139 nrnl1 Sequence 59 from patent US 8022274. 1265 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360139 nrnl1 Sequence 59 from patent US 8022274. 1265 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY457290 nrnl1 Sequence 5016 from patent US 8030546. 1097 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY457290 nrnl1 Sequence 5016 from patent US 8030546. 1097 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY457293 nrnl1 Sequence 5019 from patent US 8030546. 1484 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY457293 nrnl1 Sequence 5019 from patent US 8030546. 1484 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY714063 nrnl1 Sequence 113 from patent US 8084074. 22547 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050878 nrnl1 Sequence 20 from patent US 8101819.... 11696 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050961 nrnl1 Sequence 179 from patent US 8101819... 8611 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050962 nrnl1 Sequence 180 from patent US 8101819... 8611 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050963 nrnl1 Sequence 181 from patent US 8101819... 8611 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050964 nrnl1 Sequence 182 from patent US 8101819... 8611 bp unidentified QL-ELE-00-012 82 bp View
NRN_GZ050965 nrnl1 Sequence 183 from patent US 8101819... 8611 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.