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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GX879632 nrnl1 Sequence 247 from patent US 7847154. 10291 bp unidentified QL-ELE-00-012 82 bp View
NRN_GX879632 nrnl1 Sequence 247 from patent US 7847154. 10291 bp unidentified QL-ELE-00-012 82 bp View
NRN_GX879632 nrnl1 Sequence 247 from patent US 7847154. 10291 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY152353 nrnl1 Sequence 108 from patent US 7919601. 12368 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY152353 nrnl1 Sequence 108 from patent US 7919601. 12368 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY243939 nrnl1 Sequence 2 from patent US 7947871. 13818 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY308198 nrnl1 Sequence 376 from patent US 7977535... 415 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360129 nrnl1 Sequence 49 from patent US 8022274. 1586 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360129 nrnl1 Sequence 49 from patent US 8022274. 1586 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360130 nrnl1 Sequence 50 from patent US 8022274. 1533 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360130 nrnl1 Sequence 50 from patent US 8022274. 1533 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360131 nrnl1 Sequence 51 from patent US 8022274. 1230 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360131 nrnl1 Sequence 51 from patent US 8022274. 1230 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360132 nrnl1 Sequence 52 from patent US 8022274. 1352 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360132 nrnl1 Sequence 52 from patent US 8022274. 1352 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360133 nrnl1 Sequence 53 from patent US 8022274. 1654 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360133 nrnl1 Sequence 53 from patent US 8022274. 1654 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360134 nrnl1 Sequence 54 from patent US 8022274. 1310 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360134 nrnl1 Sequence 54 from patent US 8022274. 1310 bp unidentified QL-ELE-00-012 82 bp View
NRN_GY360135 nrnl1 Sequence 55 from patent US 8022274. 953 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.