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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GM746250 nrnl1 Sequence 50 from Patent WO200811201... 8112 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM746250 nrnl1 Sequence 50 from Patent WO200811201... 8112 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM746250 nrnl1 Sequence 50 from Patent WO200811201... 8112 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM828036 nrnl1 Sequence 7 from Patent WO2008114282. 1759 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM828036 nrnl1 Sequence 7 from Patent WO2008114282. 1759 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM828044 nrnl1 Sequence 15 from Patent WO2008114282. 1729 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM828044 nrnl1 Sequence 15 from Patent WO2008114282. 1729 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840674 nrnl1 Sequence 314 from Patent WO2008124048. 10627 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840839 nrnl1 Sequence 479 from Patent WO20081240... 11707 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840844 nrnl1 Sequence 484 from Patent WO20081240... 11706 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840845 nrnl1 Sequence 485 from Patent WO20081240... 11706 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840848 nrnl1 Sequence 488 from Patent WO2008124048. 9190 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840850 nrnl1 Sequence 490 from Patent WO2008124048. 9190 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840851 nrnl1 Sequence 491 from Patent WO2008124048. 9190 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840863 nrnl1 Sequence 503 from Patent WO2008124048. 9198 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM840872 nrnl1 Sequence 512 from Patent WO2008124048. 9241 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM864690 nrnl1 Sequence 42 from Patent WO200812824... 15900 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM952640 nrnl1 Sequence 10 from Patent WO2008141806. 1949 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM979617 nrnl1 Sequence 21 from Patent WO200814793... 7049 bp unidentified QL-ELE-00-012 82 bp View
NRN_GM979629 nrnl1 Sequence 33 from Patent WO200814793... 19604 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.