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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_FB727437 nrnl1 Sequence 15 from Patent WO200800287... 7532 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB727451 nrnl1 Sequence 29 from Patent WO200800287... 468 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729823 nrnl1 Sequence 5 from Patent EP1897953. ... 8070 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729824 nrnl1 Sequence 6 from Patent EP1897953. ... 8060 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729833 nrnl1 Sequence 2 from Patent WO2007024866... 534 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729835 nrnl1 Sequence 4 from Patent WO2007024866... 162 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729840 nrnl1 Sequence 9 from Patent WO2007024866... 3359 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729840 nrnl1 Sequence 9 from Patent WO2007024866... 3359 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729840 nrnl1 Sequence 9 from Patent WO2007024866... 3359 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729841 nrnl1 Sequence 10 from Patent WO200702486... 1343 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729841 nrnl1 Sequence 10 from Patent WO200702486... 1343 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729841 nrnl1 Sequence 10 from Patent WO200702486... 1343 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729842 nrnl1 Sequence 11 from Patent WO200702486... 2479 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729843 nrnl1 Sequence 12 from Patent WO200702486... 3331 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729843 nrnl1 Sequence 12 from Patent WO200702486... 3331 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729843 nrnl1 Sequence 12 from Patent WO200702486... 3331 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729844 nrnl1 Sequence 13 from Patent WO200702486... 2454 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729846 nrnl1 Sequence 15 from Patent WO200702486... 1340 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729846 nrnl1 Sequence 15 from Patent WO200702486... 1340 bp unidentified QL-ELE-00-012 82 bp View
NRN_FB729846 nrnl1 Sequence 15 from Patent WO200702486... 1340 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.