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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_EA135457 nrnl1 Sequence 15 from patent US 7223902. 3329 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA135458 nrnl1 Sequence 18 from patent US 7223902. 3288 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA135488 nrnl1 Sequence 1 from patent US 7223904. 2361 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA135633 nrnl1 Sequence 11 from patent US 7223907. 2267 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA135644 nrnl1 Sequence 22 from patent US 7223907. 382 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA324114 nrnl1 Sequence 12 from patent US 7303917. 1334 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA324114 nrnl1 Sequence 12 from patent US 7303917. 1334 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA327080 nrnl1 Sequence 17 from patent US 7304209.... 2838 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA327082 nrnl1 Sequence 21 from patent US 7304209.... 4677 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA327083 nrnl1 Sequence 22 from patent US 7304209.... 8187 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA753074 nrnl1 Sequence 66 from patent US 7368633. 8585 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756592 nrnl1 Sequence 1 from patent US 7371848. ... 612 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756592 nrnl1 Sequence 1 from patent US 7371848. ... 612 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756596 nrnl1 Sequence 5 from patent US 7371848. ... 332 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756596 nrnl1 Sequence 5 from patent US 7371848. ... 332 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756597 nrnl1 Sequence 6 from patent US 7371848. ... 524 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756597 nrnl1 Sequence 6 from patent US 7371848. ... 524 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756609 nrnl1 Sequence 18 from patent US 7371848.... 1273 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756609 nrnl1 Sequence 18 from patent US 7371848.... 1273 bp unidentified QL-ELE-00-012 82 bp View
NRN_EA756610 nrnl1 Sequence 19 from patent US 7371848.... 1281 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.