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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MY364835.1 emblrelpat Sequence 201 from patent US 11085049. 5368 bp unidentified QL-ELE-00-012 82 bp View
MY364835.1 emblrelpat Sequence 201 from patent US 11085049. 5368 bp unidentified QL-ELE-00-012 82 bp View
MY430008.1 emblrelpat Sequence 14464 from patent US 11111499. 781 bp unidentified QL-ELE-00-012 82 bp View
MY430009.1 emblrelpat Sequence 14465 from patent US 11111499. 877 bp unidentified QL-ELE-00-012 82 bp View
MY551700.1 emblrelpat Sequence 3833 from patent US 11130957. 781 bp unidentified QL-ELE-00-012 82 bp View
MY551701.1 emblrelpat Sequence 3834 from patent US 11130957. 877 bp unidentified QL-ELE-00-012 82 bp View
MY557220.1 emblrelpat Sequence 10 from patent US 11130967. 1149 bp unidentified QL-ELE-00-012 82 bp View
MY643747.1 emblrelpat Sequence 3 from patent US 11149282. 706 bp unidentified QL-ELE-00-012 82 bp View
MY643747.1 emblrelpat Sequence 3 from patent US 11149282. 706 bp unidentified QL-ELE-00-012 82 bp View
MZ466588.1 nt Binary vector pFGC-proCas9, complet... 13733 bp Binary vector pFGC-proCas9 QL-ELE-00-012 82 bp View
MZ555767.1 nt Synthetic construct clone IHP_0119 ... 12353 bp synthetic construct QL-ELE-00-012 82 bp View
MZ555768.1 nt Synthetic construct clone IHP_0274 ... 12439 bp synthetic construct QL-ELE-00-012 82 bp View
MZ555769.1 nt Synthetic construct clone IHP_0275 ... 12419 bp synthetic construct QL-ELE-00-012 82 bp View
MZ555770.1 nt Synthetic construct clone IHP_0276 ... 12463 bp synthetic construct QL-ELE-00-012 82 bp View
NRN_A05361 nrnl1 Synthetic CaMV DNA sequence of 35S3... 1388 bp unidentified QL-ELE-00-012 82 bp View
NRN_A17370 nrnl1 Artificial promoter-,polylinker- an... 793 bp unidentified QL-ELE-00-012 82 bp View
NRN_A17373 nrnl1 Artificial phosphinothricinacetyltr... 793 bp unidentified QL-ELE-00-012 82 bp View
NRN_A17374 nrnl1 Artificial phosphinothricinacetyltr... 793 bp unidentified QL-ELE-00-012 82 bp View
NRN_A18050 nrnl1 DNA for transforming monocotyledono... 5399 bp unidentified QL-ELE-00-012 82 bp View
NRN_A18053 nrnl1 DNA for transforming monocotyledono... 4883 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.