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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MS790123.1 emblrelpat Sequence 8 from Patent WO2017025282. 4734 bp synthetic construct QL-ELE-00-012 82 bp View
MS790124.1 emblrelpat Sequence 9 from Patent WO2017025282. 5177 bp synthetic construct QL-ELE-00-012 82 bp View
MS790125.1 emblrelpat Sequence 10 from Patent WO2017025282. 4737 bp synthetic construct QL-ELE-00-012 82 bp View
MS790126.1 emblrelpat Sequence 11 from Patent WO2017025282. 5187 bp synthetic construct QL-ELE-00-012 82 bp View
MS814969.1 emblrelpat Sequence 1 from Patent EP3160482. 21527 bp synthetic construct QL-ELE-00-012 82 bp View
MS814970.1 emblrelpat Sequence 2 from Patent EP3160482. 23512 bp synthetic construct QL-ELE-00-012 82 bp View
MS821993.1 emblrelpat Sequence 46 from Patent WO2017070029. 56493 bp synthetic construct QL-ELE-00-012 82 bp View
MS821994.1 emblrelpat Sequence 47 from Patent WO2017070029. 55518 bp synthetic construct QL-ELE-00-012 82 bp View
MS824514.1 emblrelpat Sequence 46 from Patent WO2017070032. 56493 bp synthetic construct QL-ELE-00-012 82 bp View
MS824515.1 emblrelpat Sequence 47 from Patent WO2017070032. 55518 bp synthetic construct QL-ELE-00-012 82 bp View
MS885533.1 emblrelpat Sequence 6 from Patent EP3150626. 2649 bp synthetic construct QL-ELE-00-012 82 bp View
MS885545.1 emblrelpat Sequence 18 from Patent EP3150626. 4488 bp synthetic construct QL-ELE-00-012 82 bp View
MS885545.1 emblrelpat Sequence 18 from Patent EP3150626. 4488 bp synthetic construct QL-ELE-00-012 82 bp View
MS885600.1 emblrelpat Sequence 73 from Patent EP3150626. 5444 bp synthetic construct QL-ELE-00-012 82 bp View
MS885601.1 emblrelpat Sequence 74 from Patent EP3150626. 5220 bp synthetic construct QL-ELE-00-012 82 bp View
MS885613.1 emblrelpat Sequence 86 from Patent EP3150626. 4488 bp synthetic construct QL-ELE-00-012 82 bp View
MS885613.1 emblrelpat Sequence 86 from Patent EP3150626. 4488 bp synthetic construct QL-ELE-00-012 82 bp View
MS887721.1 emblrelpat Sequence 29 from Patent WO2017005819. 7211 bp synthetic construct QL-ELE-00-012 82 bp View
MS887722.1 emblrelpat Sequence 30 from Patent WO2017005819. 7211 bp synthetic construct QL-ELE-00-012 82 bp View
MS887723.1 emblrelpat Sequence 31 from Patent WO2017005819. 7211 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.