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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MQ098926.1 emblrelpat Sequence 197 from Patent EP3846615. 9677 bp synthetic construct QL-ELE-00-012 82 bp View
MQ098927.1 emblrelpat Sequence 198 from Patent EP3846615. 9779 bp synthetic construct QL-ELE-00-012 82 bp View
MQ098927.1 emblrelpat Sequence 198 from Patent EP3846615. 9779 bp synthetic construct QL-ELE-00-012 82 bp View
MQ098927.1 emblrelpat Sequence 198 from Patent EP3846615. 9779 bp synthetic construct QL-ELE-00-012 82 bp View
MQ098927.1 emblrelpat Sequence 198 from Patent EP3846615. 9779 bp synthetic construct QL-ELE-00-012 82 bp View
MQ103465.1 emblrelpat Sequence 9 from Patent WO2021123122. 1027 bp synthetic construct QL-ELE-00-012 82 bp View
MQ103469.1 emblrelpat Sequence 13 from Patent WO2021123122. 1329 bp synthetic construct QL-ELE-00-012 82 bp View
MQ103469.1 emblrelpat Sequence 13 from Patent WO2021123122. 1329 bp synthetic construct QL-ELE-00-012 82 bp View
MQ151097.1 emblrelpat Sequence 74 from Patent EP3864155. 18400 bp synthetic construct QL-ELE-00-012 82 bp View
MQ151098.1 emblrelpat Sequence 75 from Patent EP3864155. 18402 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173728.1 emblrelpat Sequence 52 from Patent WO2021170787. 11544 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173728.1 emblrelpat Sequence 52 from Patent WO2021170787. 11544 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173730.1 emblrelpat Sequence 54 from Patent WO2021170787. 10427 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173730.1 emblrelpat Sequence 54 from Patent WO2021170787. 10427 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173731.1 emblrelpat Sequence 55 from Patent WO2021170787. 11516 bp synthetic construct QL-ELE-00-012 82 bp View
MQ173731.1 emblrelpat Sequence 55 from Patent WO2021170787. 11516 bp synthetic construct QL-ELE-00-012 82 bp View
MQ177935.1 emblrelpat Sequence 46 from Patent WO2021170785. 11544 bp synthetic construct QL-ELE-00-012 82 bp View
MQ177935.1 emblrelpat Sequence 46 from Patent WO2021170785. 11544 bp synthetic construct QL-ELE-00-012 82 bp View
MQ177937.1 emblrelpat Sequence 48 from Patent WO2021170785. 11516 bp synthetic construct QL-ELE-00-012 82 bp View
MQ177937.1 emblrelpat Sequence 48 from Patent WO2021170785. 11516 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.