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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MP749409.1 emblrelpat Sequence 65 from Patent EP3697911. 576 bp synthetic construct QL-ELE-00-012 82 bp View
MP749410.1 emblrelpat Sequence 66 from Patent EP3697911. 576 bp synthetic construct QL-ELE-00-012 82 bp View
MP749411.1 emblrelpat Sequence 67 from Patent EP3697911. 577 bp synthetic construct QL-ELE-00-012 82 bp View
MP749412.1 emblrelpat Sequence 68 from Patent EP3697911. 577 bp synthetic construct QL-ELE-00-012 82 bp View
MP749413.1 emblrelpat Sequence 69 from Patent EP3697911. 914 bp synthetic construct QL-ELE-00-012 82 bp View
MP749414.1 emblrelpat Sequence 70 from Patent EP3697911. 877 bp synthetic construct QL-ELE-00-012 82 bp View
MP749415.1 emblrelpat Sequence 71 from Patent EP3697911. 585 bp synthetic construct QL-ELE-00-012 82 bp View
MP782882.1 emblrelpat Sequence 9 from Patent EP3717650. 14008 bp synthetic construct QL-ELE-00-012 82 bp View
MP782883.1 emblrelpat Sequence 10 from Patent EP3717650. 16068 bp synthetic construct QL-ELE-00-012 82 bp View
MP846911.1 emblrelpat Sequence 14 from Patent WO2020229241. 12320 bp synthetic construct QL-ELE-00-012 82 bp View
MP883868.1 emblrelpat Sequence 22 from Patent EP3765618. 4337 bp synthetic construct QL-ELE-00-012 82 bp View
MP883868.1 emblrelpat Sequence 22 from Patent EP3765618. 4337 bp synthetic construct QL-ELE-00-012 82 bp View
MP883921.1 emblrelpat Sequence 75 from Patent EP3765618. 1959 bp synthetic construct QL-ELE-00-012 82 bp View
MP883921.1 emblrelpat Sequence 75 from Patent EP3765618. 1959 bp synthetic construct QL-ELE-00-012 82 bp View
MP883922.1 emblrelpat Sequence 76 from Patent EP3765618. 6156 bp synthetic construct QL-ELE-00-012 82 bp View
MP883922.1 emblrelpat Sequence 76 from Patent EP3765618. 6156 bp synthetic construct QL-ELE-00-012 82 bp View
MP883923.1 emblrelpat Sequence 77 from Patent EP3765618. 5502 bp synthetic construct QL-ELE-00-012 82 bp View
MP883923.1 emblrelpat Sequence 77 from Patent EP3765618. 5502 bp synthetic construct QL-ELE-00-012 82 bp View
MP936954.1 emblrelpat Sequence 3 from Patent WO2021037843. 436 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
MP977815.1 emblrelpat Sequence 66 from Patent EP3790593. 29595 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.