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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MO939757.1 emblrelpat Sequence 136 from patent US 10584346. 11726 bp unidentified QL-ELE-00-012 82 bp View
MO956536.1 emblrelpat Sequence 537 from patent US 10590430. 780 bp unidentified QL-ELE-00-012 82 bp View
MO956536.1 emblrelpat Sequence 537 from patent US 10590430. 780 bp unidentified QL-ELE-00-012 82 bp View
MO968443.1 emblrelpat Sequence 5016 from patent US 10597667. 1097 bp unidentified QL-ELE-00-012 82 bp View
MO968443.1 emblrelpat Sequence 5016 from patent US 10597667. 1097 bp unidentified QL-ELE-00-012 82 bp View
MO968446.1 emblrelpat Sequence 5019 from patent US 10597667. 1484 bp unidentified QL-ELE-00-012 82 bp View
MO968446.1 emblrelpat Sequence 5019 from patent US 10597667. 1484 bp unidentified QL-ELE-00-012 82 bp View
MO968527.1 emblrelpat Sequence 5100 from patent US 10597667. 4276 bp unidentified QL-ELE-00-012 82 bp View
MO983692.1 emblrelpat Sequence 4196 from patent US 10597671. 877 bp unidentified QL-ELE-00-012 82 bp View
MO987658.1 emblrelpat Sequence 6915 from patent US 10597672. 781 bp unidentified QL-ELE-00-012 82 bp View
MO987659.1 emblrelpat Sequence 6916 from patent US 10597672. 877 bp unidentified QL-ELE-00-012 82 bp View
MO987673.1 emblrelpat Sequence 6930 from patent US 10597672. 538 bp unidentified QL-ELE-00-012 82 bp View
MP019540.1 emblrelpat Sequence 16 from Patent WO2018197878. 7912 bp Hordeum vulgare QL-ELE-00-012 82 bp View
MP064275.1 emblrelpat Sequence 3 from Patent EP3405569. 11934 bp synthetic construct QL-ELE-00-012 82 bp View
MP064275.1 emblrelpat Sequence 3 from Patent EP3405569. 11934 bp synthetic construct QL-ELE-00-012 82 bp View
MP064275.1 emblrelpat Sequence 3 from Patent EP3405569. 11934 bp synthetic construct QL-ELE-00-012 82 bp View
MP064275.1 emblrelpat Sequence 3 from Patent EP3405569. 11934 bp synthetic construct QL-ELE-00-012 82 bp View
MP072892.1 emblrelpat Sequence 6 from Patent EP3425046. 530 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
MP117897.1 emblrelpat Sequence 23 from Patent EP3456829. 11362 bp synthetic construct QL-ELE-00-012 82 bp View
MP117898.1 emblrelpat Sequence 24 from Patent EP3456829. 12380 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.