Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *

 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

Gaps:
Mismatches:
* required field


Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MM878275.1 emblrelpat Sequence 46 from patent US 10287555. 4540 bp unidentified QL-ELE-00-012 82 bp View
MM878275.1 emblrelpat Sequence 46 from patent US 10287555. 4540 bp unidentified QL-ELE-00-012 82 bp View
MM878276.1 emblrelpat Sequence 47 from patent US 10287555. 4056 bp unidentified QL-ELE-00-012 82 bp View
MM878276.1 emblrelpat Sequence 47 from patent US 10287555. 4056 bp unidentified QL-ELE-00-012 82 bp View
MM878278.1 emblrelpat Sequence 49 from patent US 10287555. 2577 bp unidentified QL-ELE-00-012 82 bp View
MM878278.1 emblrelpat Sequence 49 from patent US 10287555. 2577 bp unidentified QL-ELE-00-012 82 bp View
MM878280.1 emblrelpat Sequence 51 from patent US 10287555. 3711 bp unidentified QL-ELE-00-012 82 bp View
MM878280.1 emblrelpat Sequence 51 from patent US 10287555. 3711 bp unidentified QL-ELE-00-012 82 bp View
MM878282.1 emblrelpat Sequence 53 from patent US 10287555. 2277 bp unidentified QL-ELE-00-012 82 bp View
MM878282.1 emblrelpat Sequence 53 from patent US 10287555. 2277 bp unidentified QL-ELE-00-012 82 bp View
MM913868.1 emblrelpat Sequence 1095 from patent US 10301625. 614 bp unidentified QL-ELE-00-012 82 bp View
MM913868.1 emblrelpat Sequence 1095 from patent US 10301625. 614 bp unidentified QL-ELE-00-012 82 bp View
MM913869.1 emblrelpat Sequence 1096 from patent US 10301625. 623 bp unidentified QL-ELE-00-012 82 bp View
MM913869.1 emblrelpat Sequence 1096 from patent US 10301625. 623 bp unidentified QL-ELE-00-012 82 bp View
MM913876.1 emblrelpat Sequence 1104 from patent US 10301625. 1448 bp unidentified QL-ELE-00-012 82 bp View
MM913876.1 emblrelpat Sequence 1104 from patent US 10301625. 1448 bp unidentified QL-ELE-00-012 82 bp View
MM913877.1 emblrelpat Sequence 1105 from patent US 10301625. 1204 bp unidentified QL-ELE-00-012 82 bp View
MM913877.1 emblrelpat Sequence 1105 from patent US 10301625. 1204 bp unidentified QL-ELE-00-012 82 bp View
MM913878.1 emblrelpat Sequence 1106 from patent US 10301625. 675 bp unidentified QL-ELE-00-012 82 bp View
MM913878.1 emblrelpat Sequence 1106 from patent US 10301625. 675 bp unidentified QL-ELE-00-012 82 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.