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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MM610850.1 emblrelpat Sequence 6 from patent US 10190179. 16752 bp unidentified QL-ELE-00-012 82 bp View
MM696264.1 emblrelpat Sequence 46 from patent US 10196648. 835 bp unidentified QL-ELE-00-012 82 bp View
MM696269.1 emblrelpat Sequence 51 from patent US 10196648. 712 bp unidentified QL-ELE-00-012 82 bp View
MM696269.1 emblrelpat Sequence 51 from patent US 10196648. 712 bp unidentified QL-ELE-00-012 82 bp View
MM696271.1 emblrelpat Sequence 53 from patent US 10196648. 1446 bp unidentified QL-ELE-00-012 82 bp View
MM696271.1 emblrelpat Sequence 53 from patent US 10196648. 1446 bp unidentified QL-ELE-00-012 82 bp View
MM696274.1 emblrelpat Sequence 56 from patent US 10196648. 675 bp unidentified QL-ELE-00-012 82 bp View
MM696274.1 emblrelpat Sequence 56 from patent US 10196648. 675 bp unidentified QL-ELE-00-012 82 bp View
MM699341.1 emblrelpat Sequence 4 from patent US 10201168. 7422 bp unidentified QL-ELE-00-012 82 bp View
MM699342.1 emblrelpat Sequence 5 from patent US 10201168. 8394 bp unidentified QL-ELE-00-012 82 bp View
MM703447.1 emblrelpat Sequence 4 from patent US 10202612. 3038 bp unidentified QL-ELE-00-012 82 bp View
MM703448.1 emblrelpat Sequence 5 from patent US 10202612. 1893 bp unidentified QL-ELE-00-012 82 bp View
MM703449.1 emblrelpat Sequence 6 from patent US 10202612. 1890 bp unidentified QL-ELE-00-012 82 bp View
MM703449.1 emblrelpat Sequence 6 from patent US 10202612. 1890 bp unidentified QL-ELE-00-012 82 bp View
MM703494.1 emblrelpat Sequence 10 from patent US 10202613. 3971 bp unidentified QL-ELE-00-012 82 bp View
MM703495.1 emblrelpat Sequence 12 from patent US 10202613. 8491 bp unidentified QL-ELE-00-012 82 bp View
MM703496.1 emblrelpat Sequence 13 from patent US 10202613. 9567 bp unidentified QL-ELE-00-012 82 bp View
MM703497.1 emblrelpat Sequence 14 from patent US 10202613. 9621 bp unidentified QL-ELE-00-012 82 bp View
MM703498.1 emblrelpat Sequence 15 from patent US 10202613. 7343 bp unidentified QL-ELE-00-012 82 bp View
MM703499.1 emblrelpat Sequence 16 from patent US 10202613. 10829 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.