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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MM030828.1 emblrelpat Sequence 235 from patent US 10087456. 11879 bp unidentified QL-ELE-00-012 82 bp View
MM072480.1 emblrelpat Sequence 209 from patent US 10093942. 574 bp unidentified QL-ELE-00-012 82 bp View
MM072480.1 emblrelpat Sequence 209 from patent US 10093942. 574 bp unidentified QL-ELE-00-012 82 bp View
MM072504.1 emblrelpat Sequence 233 from patent US 10093942. 4276 bp unidentified QL-ELE-00-012 82 bp View
MM072717.1 emblrelpat Sequence 19941 from patent US 10093943. 9769 bp unidentified QL-ELE-00-012 82 bp View
MM072717.1 emblrelpat Sequence 19941 from patent US 10093943. 9769 bp unidentified QL-ELE-00-012 82 bp View
MM072718.1 emblrelpat Sequence 19942 from patent US 10093943. 8504 bp unidentified QL-ELE-00-012 82 bp View
MM072718.1 emblrelpat Sequence 19942 from patent US 10093943. 8504 bp unidentified QL-ELE-00-012 82 bp View
MM072718.1 emblrelpat Sequence 19942 from patent US 10093943. 8504 bp unidentified QL-ELE-00-012 82 bp View
MM081855.1 emblrelpat Sequence 777 from patent US 10100326. 877 bp unidentified QL-ELE-00-012 82 bp View
MM082059.1 emblrelpat Sequence 7 from patent US 10100328. 3309 bp unidentified QL-ELE-00-012 82 bp View
MM082076.1 emblrelpat Sequence 24 from patent US 10100328. 5629 bp unidentified QL-ELE-00-012 82 bp View
MM082287.1 emblrelpat Sequence 8 from patent US 10100341. 2615 bp unidentified QL-ELE-00-012 82 bp View
MM082287.1 emblrelpat Sequence 8 from patent US 10100341. 2615 bp unidentified QL-ELE-00-012 82 bp View
MM114586.1 emblrelpat Sequence 4 from patent US 10106810. 11745 bp unidentified QL-ELE-00-012 82 bp View
MM114586.1 emblrelpat Sequence 4 from patent US 10106810. 11745 bp unidentified QL-ELE-00-012 82 bp View
MM114632.1 emblrelpat Sequence 8 from patent US 10106811. 4945 bp unidentified QL-ELE-00-012 82 bp View
MM114632.1 emblrelpat Sequence 8 from patent US 10106811. 4945 bp unidentified QL-ELE-00-012 82 bp View
MM115325.1 emblrelpat Sequence 20 from patent US 10106813. 877 bp unidentified QL-ELE-00-012 82 bp View
MM132602.1 emblrelpat Sequence 6049 from patent US 10113176. 781 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.