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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MM030684.1 emblrelpat Sequence 75 from patent US 10087456. 11693 bp unidentified QL-ELE-00-012 82 bp View
MM030704.1 emblrelpat Sequence 98 from patent US 10087456. 8641 bp unidentified QL-ELE-00-012 82 bp View
MM030705.1 emblrelpat Sequence 99 from patent US 10087456. 8641 bp unidentified QL-ELE-00-012 82 bp View
MM030706.1 emblrelpat Sequence 100 from patent US 10087456. 8641 bp unidentified QL-ELE-00-012 82 bp View
MM030707.1 emblrelpat Sequence 101 from patent US 10087456. 11647 bp unidentified QL-ELE-00-012 82 bp View
MM030708.1 emblrelpat Sequence 102 from patent US 10087456. 11611 bp unidentified QL-ELE-00-012 82 bp View
MM030709.1 emblrelpat Sequence 103 from patent US 10087456. 11649 bp unidentified QL-ELE-00-012 82 bp View
MM030759.1 emblrelpat Sequence 159 from patent US 10087456. 8654 bp unidentified QL-ELE-00-012 82 bp View
MM030763.1 emblrelpat Sequence 164 from patent US 10087456. 8653 bp unidentified QL-ELE-00-012 82 bp View
MM030765.1 emblrelpat Sequence 166 from patent US 10087456. 7096 bp unidentified QL-ELE-00-012 82 bp View
MM030766.1 emblrelpat Sequence 167 from patent US 10087456. 7497 bp unidentified QL-ELE-00-012 82 bp View
MM030788.1 emblrelpat Sequence 195 from patent US 10087456. 5303 bp unidentified QL-ELE-00-012 82 bp View
MM030789.1 emblrelpat Sequence 196 from patent US 10087456. 8358 bp unidentified QL-ELE-00-012 82 bp View
MM030791.1 emblrelpat Sequence 198 from patent US 10087456. 9592 bp unidentified QL-ELE-00-012 82 bp View
MM030798.1 emblrelpat Sequence 205 from patent US 10087456. 10303 bp unidentified QL-ELE-00-012 82 bp View
MM030808.1 emblrelpat Sequence 215 from patent US 10087456. 11615 bp unidentified QL-ELE-00-012 82 bp View
MM030813.1 emblrelpat Sequence 220 from patent US 10087456. 8819 bp unidentified QL-ELE-00-012 82 bp View
MM030817.1 emblrelpat Sequence 224 from patent US 10087456. 9396 bp unidentified QL-ELE-00-012 82 bp View
MM030818.1 emblrelpat Sequence 225 from patent US 10087456. 11440 bp unidentified QL-ELE-00-012 82 bp View
MM030822.1 emblrelpat Sequence 229 from patent US 10087456. 11111 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.