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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI927086.1 emblrelpat Sequence 62 from patent US 10036030. 13868 bp unidentified QL-ELE-00-012 82 bp View
MI927087.1 emblrelpat Sequence 63 from patent US 10036030. 13631 bp unidentified QL-ELE-00-012 82 bp View
MI927093.1 emblrelpat Sequence 71 from patent US 10036030. 10115 bp unidentified QL-ELE-00-012 82 bp View
MI927094.1 emblrelpat Sequence 72 from patent US 10036030. 10462 bp unidentified QL-ELE-00-012 82 bp View
MI927095.1 emblrelpat Sequence 73 from patent US 10036030. 13440 bp unidentified QL-ELE-00-012 82 bp View
MI927096.1 emblrelpat Sequence 74 from patent US 10036030. 13787 bp unidentified QL-ELE-00-012 82 bp View
MI927097.1 emblrelpat Sequence 75 from patent US 10036030. 13470 bp unidentified QL-ELE-00-012 82 bp View
MI927098.1 emblrelpat Sequence 76 from patent US 10036030. 13817 bp unidentified QL-ELE-00-012 82 bp View
MI927107.1 emblrelpat Sequence 87 from patent US 10036030. 9401 bp unidentified QL-ELE-00-012 82 bp View
MI927108.1 emblrelpat Sequence 88 from patent US 10036030. 10648 bp unidentified QL-ELE-00-012 82 bp View
MI927109.1 emblrelpat Sequence 89 from patent US 10036030. 14004 bp unidentified QL-ELE-00-012 82 bp View
MI927601.1 emblrelpat Sequence 921 from patent US 10036031. 877 bp unidentified QL-ELE-00-012 82 bp View
MI938482.1 emblrelpat Sequence 4 from patent US 10041085. 835 bp unidentified QL-ELE-00-012 82 bp View
MI960783.1 emblrelpat Sequence 51 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960783.1 emblrelpat Sequence 51 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960783.1 emblrelpat Sequence 51 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960784.1 emblrelpat Sequence 52 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960784.1 emblrelpat Sequence 52 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960784.1 emblrelpat Sequence 52 from patent US 10053675. 11208 bp unidentified QL-ELE-00-012 82 bp View
MI960819.1 emblrelpat Sequence 87 from patent US 10053675. 744 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.