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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI866745.1 emblrelpat Sequence 181 from patent US 10017777. 8611 bp unidentified QL-ELE-00-012 82 bp View
MI866746.1 emblrelpat Sequence 182 from patent US 10017777. 8611 bp unidentified QL-ELE-00-012 82 bp View
MI866747.1 emblrelpat Sequence 183 from patent US 10017777. 8611 bp unidentified QL-ELE-00-012 82 bp View
MI879844.1 emblrelpat Sequence 28 from patent US 10023878. 345 bp unidentified QL-ELE-00-012 83 bp View
MI880446.1 emblrelpat Sequence 24 from patent US 10023921. 11361 bp unidentified QL-ELE-00-012 82 bp View
MI880447.1 emblrelpat Sequence 25 from patent US 10023921. 6186 bp unidentified QL-ELE-00-012 82 bp View
MI882955.1 emblrelpat Sequence 37 from patent US 10030245. 5056 bp unidentified QL-ELE-00-012 82 bp View
MI884978.1 emblrelpat Sequence 9 from patent US 10030277. 4105 bp unidentified QL-ELE-00-012 82 bp View
MI884978.1 emblrelpat Sequence 9 from patent US 10030277. 4105 bp unidentified QL-ELE-00-012 82 bp View
MI884979.1 emblrelpat Sequence 10 from patent US 10030277. 6369 bp unidentified QL-ELE-00-012 82 bp View
MI884979.1 emblrelpat Sequence 10 from patent US 10030277. 6369 bp unidentified QL-ELE-00-012 82 bp View
MI927051.1 emblrelpat Sequence 14 from patent US 10036030. 9266 bp unidentified QL-ELE-00-012 82 bp View
MI927076.1 emblrelpat Sequence 50 from patent US 10036030. 9979 bp unidentified QL-ELE-00-012 82 bp View
MI927077.1 emblrelpat Sequence 51 from patent US 10036030. 10513 bp unidentified QL-ELE-00-012 82 bp View
MI927078.1 emblrelpat Sequence 52 from patent US 10036030. 10276 bp unidentified QL-ELE-00-012 82 bp View
MI927079.1 emblrelpat Sequence 53 from patent US 10036030. 10995 bp unidentified QL-ELE-00-012 82 bp View
MI927081.1 emblrelpat Sequence 56 from patent US 10036030. 13304 bp unidentified QL-ELE-00-012 82 bp View
MI927082.1 emblrelpat Sequence 57 from patent US 10036030. 13838 bp unidentified QL-ELE-00-012 82 bp View
MI927083.1 emblrelpat Sequence 58 from patent US 10036030. 13601 bp unidentified QL-ELE-00-012 82 bp View
MI927085.1 emblrelpat Sequence 61 from patent US 10036030. 13334 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.