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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI864563.1 emblrelpat Sequence 25 from patent US 10017549. 1864 bp unidentified QL-ELE-00-012 82 bp View
MI864564.1 emblrelpat Sequence 26 from patent US 10017549. 1864 bp unidentified QL-ELE-00-012 82 bp View
MI864564.1 emblrelpat Sequence 26 from patent US 10017549. 1864 bp unidentified QL-ELE-00-012 82 bp View
MI864565.1 emblrelpat Sequence 27 from patent US 10017549. 1864 bp unidentified QL-ELE-00-012 82 bp View
MI864565.1 emblrelpat Sequence 27 from patent US 10017549. 1864 bp unidentified QL-ELE-00-012 82 bp View
MI866520.1 emblrelpat Sequence 132 from patent US 10017773. 14478 bp unidentified QL-ELE-00-012 82 bp View
MI866520.1 emblrelpat Sequence 132 from patent US 10017773. 14478 bp unidentified QL-ELE-00-012 82 bp View
MI866521.1 emblrelpat Sequence 133 from patent US 10017773. 14488 bp unidentified QL-ELE-00-012 82 bp View
MI866521.1 emblrelpat Sequence 133 from patent US 10017773. 14488 bp unidentified QL-ELE-00-012 82 bp View
MI866522.1 emblrelpat Sequence 134 from patent US 10017773. 12194 bp unidentified QL-ELE-00-012 82 bp View
MI866522.1 emblrelpat Sequence 134 from patent US 10017773. 12194 bp unidentified QL-ELE-00-012 82 bp View
MI866523.1 emblrelpat Sequence 135 from patent US 10017773. 12187 bp unidentified QL-ELE-00-012 82 bp View
MI866523.1 emblrelpat Sequence 135 from patent US 10017773. 12187 bp unidentified QL-ELE-00-012 82 bp View
MI866524.1 emblrelpat Sequence 136 from patent US 10017773. 11726 bp unidentified QL-ELE-00-012 82 bp View
MI866524.1 emblrelpat Sequence 136 from patent US 10017773. 11726 bp unidentified QL-ELE-00-012 82 bp View
MI866660.1 emblrelpat Sequence 20 from patent US 10017777. 11696 bp unidentified QL-ELE-00-012 82 bp View
MI866661.1 emblrelpat Sequence 21 from patent US 10017777. 10866 bp unidentified QL-ELE-00-012 82 bp View
MI866742.1 emblrelpat Sequence 178 from patent US 10017777. 7085 bp unidentified QL-ELE-00-012 82 bp View
MI866743.1 emblrelpat Sequence 179 from patent US 10017777. 8611 bp unidentified QL-ELE-00-012 82 bp View
MI866744.1 emblrelpat Sequence 180 from patent US 10017777. 8611 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.