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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI828836.1 emblrelpat Sequence 4 from patent US 9999607. 22824 bp unidentified QL-ELE-00-012 82 bp View
MI828837.1 emblrelpat Sequence 5 from patent US 9999607. 24809 bp unidentified QL-ELE-00-012 82 bp View
MI828838.1 emblrelpat Sequence 6 from patent US 9999607. 26543 bp unidentified QL-ELE-00-012 82 bp View
MI828839.1 emblrelpat Sequence 7 from patent US 9999607. 23760 bp unidentified QL-ELE-00-012 82 bp View
MI828840.1 emblrelpat Sequence 8 from patent US 9999607. 11042 bp unidentified QL-ELE-00-012 82 bp View
MI828840.1 emblrelpat Sequence 8 from patent US 9999607. 11042 bp unidentified QL-ELE-00-012 82 bp View
MI828840.1 emblrelpat Sequence 8 from patent US 9999607. 11042 bp unidentified QL-ELE-00-012 82 bp View
MI828840.1 emblrelpat Sequence 8 from patent US 9999607. 11042 bp unidentified QL-ELE-00-012 82 bp View
MI837226.1 emblrelpat Sequence 1 from patent US 10005713. 21527 bp unidentified QL-ELE-00-012 82 bp View
MI837227.1 emblrelpat Sequence 2 from patent US 10005713. 23512 bp unidentified QL-ELE-00-012 82 bp View
MI838409.1 emblrelpat Sequence 8 from patent US 10006034. 2615 bp unidentified QL-ELE-00-012 82 bp View
MI838409.1 emblrelpat Sequence 8 from patent US 10006034. 2615 bp unidentified QL-ELE-00-012 82 bp View
MI838523.1 emblrelpat Sequence 152 from patent US 10006034. 2435 bp unidentified QL-ELE-00-012 82 bp View
MI838523.1 emblrelpat Sequence 152 from patent US 10006034. 2435 bp unidentified QL-ELE-00-012 82 bp View
MI838639.1 emblrelpat Sequence 4 from patent US 10006037. 15898 bp unidentified QL-ELE-00-012 82 bp View
MI838640.1 emblrelpat Sequence 5 from patent US 10006037. 16941 bp unidentified QL-ELE-00-012 82 bp View
MI838641.1 emblrelpat Sequence 6 from patent US 10006037. 15975 bp unidentified QL-ELE-00-012 82 bp View
MI838695.1 emblrelpat Sequence 60 from patent US 10006037. 15857 bp unidentified QL-ELE-00-012 82 bp View
MI838696.1 emblrelpat Sequence 61 from patent US 10006037. 14891 bp unidentified QL-ELE-00-012 82 bp View
MI838778.1 emblrelpat Sequence 33 from patent US 10006039. 345 bp unidentified QL-ELE-00-012 83 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.