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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI656516.1 emblrelpat Sequence 124 from patent US 9970022. 6103 bp unidentified QL-ELE-00-012 82 bp View
MI666247.1 emblrelpat Sequence 128 from patent US 9976154. 8756 bp unidentified QL-ELE-00-012 82 bp View
MI666248.1 emblrelpat Sequence 129 from patent US 9976154. 8720 bp unidentified QL-ELE-00-012 82 bp View
MI666250.1 emblrelpat Sequence 131 from patent US 9976154. 11625 bp unidentified QL-ELE-00-012 82 bp View
MI666253.1 emblrelpat Sequence 134 from patent US 9976154. 11622 bp unidentified QL-ELE-00-012 82 bp View
MI666255.1 emblrelpat Sequence 136 from patent US 9976154. 11889 bp unidentified QL-ELE-00-012 82 bp View
MI666271.1 emblrelpat Sequence 153 from patent US 9976154. 11582 bp unidentified QL-ELE-00-012 82 bp View
MI666274.1 emblrelpat Sequence 156 from patent US 9976154. 11876 bp unidentified QL-ELE-00-012 82 bp View
MI666279.1 emblrelpat Sequence 161 from patent US 9976154. 11612 bp unidentified QL-ELE-00-012 82 bp View
MI666280.1 emblrelpat Sequence 162 from patent US 9976154. 6747 bp unidentified QL-ELE-00-012 82 bp View
MI666281.1 emblrelpat Sequence 163 from patent US 9976154. 8303 bp unidentified QL-ELE-00-012 82 bp View
MI666282.1 emblrelpat Sequence 164 from patent US 9976154. 11169 bp unidentified QL-ELE-00-012 82 bp View
MI666283.1 emblrelpat Sequence 165 from patent US 9976154. 11129 bp unidentified QL-ELE-00-012 82 bp View
MI666284.1 emblrelpat Sequence 166 from patent US 9976154. 11423 bp unidentified QL-ELE-00-012 82 bp View
MI666285.1 emblrelpat Sequence 167 from patent US 9976154. 11159 bp unidentified QL-ELE-00-012 82 bp View
MI671176.1 emblrelpat Sequence 8526 from patent US 9976157. 781 bp unidentified QL-ELE-00-012 82 bp View
MI671177.1 emblrelpat Sequence 8527 from patent US 9976157. 877 bp unidentified QL-ELE-00-012 82 bp View
MI828833.1 emblrelpat Sequence 1 from patent US 9999607. 21527 bp unidentified QL-ELE-00-012 82 bp View
MI828834.1 emblrelpat Sequence 2 from patent US 9999607. 23512 bp unidentified QL-ELE-00-012 82 bp View
MI828835.1 emblrelpat Sequence 3 from patent US 9999607. 25787 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.