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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI322507.1 emblrelpat Sequence 176 from patent US 9834777. 623 bp unidentified QL-ELE-00-012 82 bp View
MI322507.1 emblrelpat Sequence 176 from patent US 9834777. 623 bp unidentified QL-ELE-00-012 82 bp View
MI322609.1 emblrelpat Sequence 31 from patent US 9834781. 877 bp unidentified QL-ELE-00-012 82 bp View
MI328611.1 emblrelpat Sequence 10572 from patent US 9834782. 781 bp unidentified QL-ELE-00-012 82 bp View
MI328612.1 emblrelpat Sequence 10573 from patent US 9834782. 877 bp unidentified QL-ELE-00-012 82 bp View
MI347781.1 emblrelpat Sequence 201 from patent US 9845477. 712 bp unidentified QL-ELE-00-012 82 bp View
MI347781.1 emblrelpat Sequence 201 from patent US 9845477. 712 bp unidentified QL-ELE-00-012 82 bp View
MI347790.1 emblrelpat Sequence 210 from patent US 9845477. 622 bp unidentified QL-ELE-00-012 82 bp View
MI347790.1 emblrelpat Sequence 210 from patent US 9845477. 622 bp unidentified QL-ELE-00-012 82 bp View
MI377315.1 emblrelpat Sequence 21 from patent US 9856489. 12295 bp unidentified QL-ELE-00-012 82 bp View
MI377397.1 emblrelpat Sequence 29 from patent US 9856491. 1800 bp unidentified QL-ELE-00-012 82 bp View
MI377397.1 emblrelpat Sequence 29 from patent US 9856491. 1800 bp unidentified QL-ELE-00-012 82 bp View
MI377398.1 emblrelpat Sequence 30 from patent US 9856491. 1742 bp unidentified QL-ELE-00-012 82 bp View
MI377398.1 emblrelpat Sequence 30 from patent US 9856491. 1742 bp unidentified QL-ELE-00-012 82 bp View
MI379424.1 emblrelpat Sequence 18 from patent US 9861105. 14241 bp unidentified QL-ELE-00-012 82 bp View
MI382417.1 emblrelpat Sequence 10024 from patent US 9862959. 9215 bp unidentified QL-ELE-00-012 82 bp View
MI382418.1 emblrelpat Sequence 10025 from patent US 9862959. 9747 bp unidentified QL-ELE-00-012 82 bp View
MI382419.1 emblrelpat Sequence 10026 from patent US 9862959. 10289 bp unidentified QL-ELE-00-012 82 bp View
MI382420.1 emblrelpat Sequence 10027 from patent US 9862959. 9754 bp unidentified QL-ELE-00-012 82 bp View
MI382420.1 emblrelpat Sequence 10027 from patent US 9862959. 9754 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.