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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MI117654.1 emblrelpat Sequence 367 from patent US 9790514. 8791 bp unidentified QL-ELE-00-012 82 bp View
MI117655.1 emblrelpat Sequence 368 from patent US 9790514. 8329 bp unidentified QL-ELE-00-012 82 bp View
MI117656.1 emblrelpat Sequence 369 from patent US 9790514. 8206 bp unidentified QL-ELE-00-012 82 bp View
MI117657.1 emblrelpat Sequence 370 from patent US 9790514. 8314 bp unidentified QL-ELE-00-012 82 bp View
MI117658.1 emblrelpat Sequence 371 from patent US 9790514. 8137 bp unidentified QL-ELE-00-012 82 bp View
MI117659.1 emblrelpat Sequence 372 from patent US 9790514. 8092 bp unidentified QL-ELE-00-012 82 bp View
MI117660.1 emblrelpat Sequence 373 from patent US 9790514. 8602 bp unidentified QL-ELE-00-012 82 bp View
MI117661.1 emblrelpat Sequence 374 from patent US 9790514. 8761 bp unidentified QL-ELE-00-012 82 bp View
MI117662.1 emblrelpat Sequence 375 from patent US 9790514. 8674 bp unidentified QL-ELE-00-012 82 bp View
MI117745.1 emblrelpat Sequence 105 from patent US 9790516. 1064 bp unidentified QL-ELE-00-012 82 bp View
MI117745.1 emblrelpat Sequence 105 from patent US 9790516. 1064 bp unidentified QL-ELE-00-012 82 bp View
MI117746.1 emblrelpat Sequence 106 from patent US 9790516. 1156 bp unidentified QL-ELE-00-012 82 bp View
MI117746.1 emblrelpat Sequence 106 from patent US 9790516. 1156 bp unidentified QL-ELE-00-012 82 bp View
MI123453.1 emblrelpat Sequence 5 from patent US 9790561. 11978 bp unidentified QL-ELE-00-012 82 bp View
MI123454.1 emblrelpat Sequence 6 from patent US 9790561. 16752 bp unidentified QL-ELE-00-012 82 bp View
MI160142.1 emblrelpat Sequence 7 from patent US 9803214. 5804 bp unidentified QL-ELE-00-012 82 bp View
MI160147.1 emblrelpat Sequence 12 from patent US 9803214. 5840 bp unidentified QL-ELE-00-012 82 bp View
MI160148.1 emblrelpat Sequence 13 from patent US 9803214. 6897 bp unidentified QL-ELE-00-012 82 bp View
MI175750.1 emblrelpat Sequence 38 from patent US 9809826. 15162 bp unidentified QL-ELE-00-012 82 bp View
MI175751.1 emblrelpat Sequence 39 from patent US 9809826. 15162 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.