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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MB446230.1 emblrelpat JP 2018148907-A/1: Method for produ... 12295 bp synthetic construct QL-ELE-00-012 82 bp View
MB463585.1 emblrelpat JP 2018527931-A/72: OCHROBACTRUM-ME... 20570 bp synthetic construct QL-ELE-00-012 82 bp View
MB463586.1 emblrelpat JP 2018527931-A/73: OCHROBACTRUM-ME... 20572 bp synthetic construct QL-ELE-00-012 82 bp View
MB463621.1 emblrelpat JP 2018527931-A/108: OCHROBACTRUM-M... 22277 bp synthetic construct QL-ELE-00-012 82 bp View
MB463622.1 emblrelpat JP 2018527931-A/109: OCHROBACTRUM-M... 40301 bp synthetic construct QL-ELE-00-012 82 bp View
MB479567.1 emblrelpat JP 2019527069-A/41: ELITE EVENT CAN... 49789 bp synthetic construct QL-ELE-00-012 82 bp View
MB479567.1 emblrelpat JP 2019527069-A/41: ELITE EVENT CAN... 49789 bp synthetic construct QL-ELE-00-012 82 bp View
MB489032.1 emblrelpat WO 2020022461-A/1: Method for inhib... 362 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
MB489033.1 emblrelpat WO 2020022461-A/2: Method for inhib... 345 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
MC003120.1 emblrelpat WO 2020031985-A/5: Construction of ... 18489 bp synthetic construct QL-ELE-00-012 82 bp View
MC003120.1 emblrelpat WO 2020031985-A/5: Construction of ... 18489 bp synthetic construct QL-ELE-00-012 82 bp View
MC003121.1 emblrelpat WO 2020031985-A/6: Construction of ... 22760 bp synthetic construct QL-ELE-00-012 82 bp View
MC003121.1 emblrelpat WO 2020031985-A/6: Construction of ... 22760 bp synthetic construct QL-ELE-00-012 82 bp View
MC003121.1 emblrelpat WO 2020031985-A/6: Construction of ... 22760 bp synthetic construct QL-ELE-00-012 82 bp View
MC023362.1 emblrelpat JP 2018531024-A/43: METHODS AND COM... 56493 bp synthetic construct QL-ELE-00-012 82 bp View
MC023363.1 emblrelpat JP 2018531024-A/44: METHODS AND COM... 55518 bp synthetic construct QL-ELE-00-012 82 bp View
MD243866.1 emblrelpat JP 2020513753-A/9: Elite Event EE-G... 8068 bp synthetic construct QL-ELE-00-012 82 bp View
MD244702.1 emblrelpat JP 2020513822-A/10: Bacteriocins fo... 11586 bp synthetic construct QL-ELE-00-012 82 bp View
MD390381.1 emblrelpat JP 2020519239-A/1: EXPRESSION VECTO... 15521 bp synthetic construct QL-ELE-00-012 82 bp View
MD390381.1 emblrelpat JP 2020519239-A/1: EXPRESSION VECTO... 15521 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.