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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LZ177935.1 emblrelpat JP 2017140019-A/3: PRODUCTION OF TA... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LZ254410.1 emblrelpat JP 2016182145-A/3: Tailored Oils Pr... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LZ254410.1 emblrelpat JP 2016182145-A/3: Tailored Oils Pr... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LZ983814.1 emblrelpat JP 2017529060-A/1: PROCESSES FOR PR... 11142 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983814.1 emblrelpat JP 2017529060-A/1: PROCESSES FOR PR... 11142 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983814.1 emblrelpat JP 2017529060-A/1: PROCESSES FOR PR... 11142 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983814.1 emblrelpat JP 2017529060-A/1: PROCESSES FOR PR... 11142 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983815.1 emblrelpat JP 2017529060-A/2: PROCESSES FOR PR... 16749 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983815.1 emblrelpat JP 2017529060-A/2: PROCESSES FOR PR... 16749 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983815.1 emblrelpat JP 2017529060-A/2: PROCESSES FOR PR... 16749 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983815.1 emblrelpat JP 2017529060-A/2: PROCESSES FOR PR... 16749 bp synthetic construct QL-ELE-00-012 82 bp View
LZ983815.1 emblrelpat JP 2017529060-A/2: PROCESSES FOR PR... 16749 bp synthetic construct QL-ELE-00-012 82 bp View
LZ992501.1 emblrelpat JP 2017532949-A/1: LIPID COMPRISING... 21527 bp synthetic construct QL-ELE-00-012 82 bp View
LZ992502.1 emblrelpat JP 2017532949-A/2: LIPID COMPRISING... 23512 bp synthetic construct QL-ELE-00-012 82 bp View
M32811.1 nt Cauliflower mosaic virus matrix pro... 972 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
M61152.1 nt Artificial T-DNA conferring express... 6082 bp synthetic construct QL-ELE-00-012 82 bp View
M74305.1 nt Synthetic expression vector pUC18cp... 480 bp synthetic construct QL-ELE-00-012 82 bp View
M90541.1 nt Cauliflower mosaic virus isolate NY... 8030 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
M90542.1 nt Cauliflower mosaic virus isolate BB... 8032 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
MA005680.1 emblrelpat JP 2018007674-A/9: SOYBEAN EVENT SY... 7914 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.