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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LY998759.1 emblrelpat KR 1020200056434-A/157: TISSUE-PREF... 15458 bp synthetic construct QL-ELE-00-012 82 bp View
LY998760.1 emblrelpat KR 1020200056434-A/158: TISSUE-PREF... 15376 bp synthetic construct QL-ELE-00-012 82 bp View
LY998761.1 emblrelpat KR 1020200056434-A/159: TISSUE-PREF... 15431 bp synthetic construct QL-ELE-00-012 82 bp View
LY998762.1 emblrelpat KR 1020200056434-A/160: TISSUE-PREF... 15349 bp synthetic construct QL-ELE-00-012 82 bp View
LY998763.1 emblrelpat KR 1020200056434-A/161: TISSUE-PREF... 15440 bp synthetic construct QL-ELE-00-012 82 bp View
LY998764.1 emblrelpat KR 1020200056434-A/162: TISSUE-PREF... 15202 bp synthetic construct QL-ELE-00-012 82 bp View
LY998765.1 emblrelpat KR 1020200056434-A/163: TISSUE-PREF... 15343 bp synthetic construct QL-ELE-00-012 82 bp View
LY998766.1 emblrelpat KR 1020200056434-A/164: TISSUE-PREF... 15303 bp synthetic construct QL-ELE-00-012 82 bp View
LY998767.1 emblrelpat KR 1020200056434-A/165: TISSUE-PREF... 15478 bp synthetic construct QL-ELE-00-012 82 bp View
LY998768.1 emblrelpat KR 1020200056434-A/166: TISSUE-PREF... 15395 bp synthetic construct QL-ELE-00-012 82 bp View
LY998769.1 emblrelpat KR 1020200056434-A/167: TISSUE-PREF... 15349 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100700.1 emblrelpat JP 2017513467-A/8: Modified CPMV En... 4903 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100700.1 emblrelpat JP 2017513467-A/8: Modified CPMV En... 4903 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100701.1 emblrelpat JP 2017513467-A/9: Modified CPMV En... 3465 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100701.1 emblrelpat JP 2017513467-A/9: Modified CPMV En... 3465 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100703.1 emblrelpat JP 2017513467-A/11: Modified CPMV E... 4914 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100703.1 emblrelpat JP 2017513467-A/11: Modified CPMV E... 4914 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100704.1 emblrelpat JP 2017513467-A/12: Modified CPMV E... 3480 bp synthetic construct QL-ELE-00-012 82 bp View
LZ100704.1 emblrelpat JP 2017513467-A/12: Modified CPMV E... 3480 bp synthetic construct QL-ELE-00-012 82 bp View
LZ177935.1 emblrelpat JP 2017140019-A/3: PRODUCTION OF TA... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.