European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LY798569.1 emblrelpat KR 1020200004185-A/1: Gene delivery... 16236 bp synthetic construct QL-ELE-00-012 82 bp View
LY798570.1 emblrelpat KR 1020200004185-A/2: Gene delivery... 14014 bp synthetic construct QL-ELE-00-012 82 bp View
LY798570.1 emblrelpat KR 1020200004185-A/2: Gene delivery... 14014 bp synthetic construct QL-ELE-00-012 82 bp View
LY798571.1 emblrelpat KR 1020200004185-A/3: Gene delivery... 15496 bp synthetic construct QL-ELE-00-012 82 bp View
LY798571.1 emblrelpat KR 1020200004185-A/3: Gene delivery... 15496 bp synthetic construct QL-ELE-00-012 82 bp View
LY802596.1 emblrelpat KR 1020200011845-A/1: Virus-induced... 16236 bp synthetic construct QL-ELE-00-012 82 bp View
LY802596.1 emblrelpat KR 1020200011845-A/1: Virus-induced... 16236 bp synthetic construct QL-ELE-00-012 82 bp View
LY802597.1 emblrelpat KR 1020200011845-A/2: Virus-induced... 13906 bp synthetic construct QL-ELE-00-012 82 bp View
LY802597.1 emblrelpat KR 1020200011845-A/2: Virus-induced... 13906 bp synthetic construct QL-ELE-00-012 82 bp View
LY802598.1 emblrelpat KR 1020200011845-A/3: Virus-induced... 14142 bp synthetic construct QL-ELE-00-012 82 bp View
LY802598.1 emblrelpat KR 1020200011845-A/3: Virus-induced... 14142 bp synthetic construct QL-ELE-00-012 82 bp View
LY803191.1 emblrelpat KR 1020200022970-A/5: Production me... 623 bp synthetic construct QL-ELE-00-012 82 bp View
LY981336.1 emblrelpat KR 1020200062184-A/3: COMPOSITIONS ... 780 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LY981336.1 emblrelpat KR 1020200062184-A/3: COMPOSITIONS ... 780 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LY988634.1 emblrelpat KR 1020200039775-A/29: TARGET SEQUE... 820 bp synthetic construct QL-ELE-00-012 82 bp View
LY988634.1 emblrelpat KR 1020200039775-A/29: TARGET SEQUE... 820 bp synthetic construct QL-ELE-00-012 82 bp View
LY998755.1 emblrelpat KR 1020200056434-A/153: TISSUE-PREF... 11210 bp synthetic construct QL-ELE-00-012 82 bp View
LY998756.1 emblrelpat KR 1020200056434-A/154: TISSUE-PREF... 15172 bp synthetic construct QL-ELE-00-012 82 bp View
LY998757.1 emblrelpat KR 1020200056434-A/155: TISSUE-PREF... 15352 bp synthetic construct QL-ELE-00-012 82 bp View
LY998758.1 emblrelpat KR 1020200056434-A/156: TISSUE-PREF... 15433 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.