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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LY641651.1 emblrelpat KR 1020180122486-A/152: TAILORED OI... 2435 bp synthetic construct QL-ELE-00-012 82 bp View
LY641651.1 emblrelpat KR 1020180122486-A/152: TAILORED OI... 2435 bp synthetic construct QL-ELE-00-012 82 bp View
LY643622.1 emblrelpat KR 1020180137558-A/69: CONSTRUCT AN... 5252 bp synthetic construct QL-ELE-00-012 82 bp View
LY643623.1 emblrelpat KR 1020180137558-A/70: CONSTRUCT AN... 16273 bp synthetic construct QL-ELE-00-012 82 bp View
LY643635.1 emblrelpat KR 1020180137558-A/82: CONSTRUCT AN... 16558 bp synthetic construct QL-ELE-00-012 82 bp View
LY654992.1 emblrelpat KR 1020190047914-A/3: Recombinant v... 892 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LY660357.1 emblrelpat KR 1020190016466-A/21: Mutant anti-... 16454 bp synthetic construct QL-ELE-00-012 82 bp View
LY660357.1 emblrelpat KR 1020190016466-A/21: Mutant anti-... 16454 bp synthetic construct QL-ELE-00-012 82 bp View
LY667603.1 emblrelpat KR 1020190003994-A/5: NUCLEIC ACID ... 7059 bp synthetic construct QL-ELE-00-012 82 bp View
LY668962.1 emblrelpat KR 1020190008933-A/9: PLANT REGULAT... 631 bp synthetic construct QL-ELE-00-012 82 bp View
LY668962.1 emblrelpat KR 1020190008933-A/9: PLANT REGULAT... 631 bp synthetic construct QL-ELE-00-012 82 bp View
LY670910.1 emblrelpat KR 1020190026725-A/3: A method of h... 835 bp synthetic construct QL-ELE-00-012 82 bp View
LY703301.1 emblrelpat KR 1020190036570-A/8: MICROBIAL OIL... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LY703301.1 emblrelpat KR 1020190036570-A/8: MICROBIAL OIL... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LY703395.1 emblrelpat KR 1020190036571-A/8: TAILORED OILS... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LY703395.1 emblrelpat KR 1020190036571-A/8: TAILORED OILS... 2615 bp Saccharomyces cerevisiae QL-ELE-00-012 82 bp View
LY705927.1 emblrelpat KR 1020190051045-A/4: TARGETED GENO... 16730 bp synthetic construct QL-ELE-00-012 82 bp View
LY709459.1 emblrelpat KR 1020190050862-A/1: METHOD OF PRE... 3067 bp synthetic construct QL-ELE-00-012 82 bp View
LY716705.1 emblrelpat KR 1020190102964-A/5: Transgenic to... 623 bp synthetic construct QL-ELE-00-012 82 bp View
LY798569.1 emblrelpat KR 1020200004185-A/1: Gene delivery... 16236 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.