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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ954980.1 emblrelpat Sequence 3 from Patent WO2014194190. 15005 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954981.1 emblrelpat Sequence 4 from Patent WO2014194190. 9552 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954982.1 emblrelpat Sequence 5 from Patent WO2014194190. 15366 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954982.1 emblrelpat Sequence 5 from Patent WO2014194190. 15366 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954982.1 emblrelpat Sequence 5 from Patent WO2014194190. 15366 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954983.1 emblrelpat Sequence 6 from Patent WO2014194190. 9188 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954984.1 emblrelpat Sequence 7 from Patent WO2014194190. 15001 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954984.1 emblrelpat Sequence 7 from Patent WO2014194190. 15001 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954984.1 emblrelpat Sequence 7 from Patent WO2014194190. 15001 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954986.1 emblrelpat Sequence 9 from Patent WO2014194190. 15905 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954986.1 emblrelpat Sequence 9 from Patent WO2014194190. 15905 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954987.1 emblrelpat Sequence 10 from Patent WO2014194190. 8678 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954988.1 emblrelpat Sequence 11 from Patent WO2014194190. 14951 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954988.1 emblrelpat Sequence 11 from Patent WO2014194190. 14951 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954988.1 emblrelpat Sequence 11 from Patent WO2014194190. 14951 bp synthetic construct QL-ELE-00-012 82 bp View
LQ969879.1 emblrelpat Sequence 5 from Patent WO2014198885. 15461 bp synthetic construct QL-ELE-00-012 82 bp View
LQ976762.1 emblrelpat Sequence 22 from Patent WO2013040213. 8406 bp synthetic construct QL-ELE-00-012 82 bp View
LQ976763.1 emblrelpat Sequence 23 from Patent WO2013040213. 8913 bp synthetic construct QL-ELE-00-012 82 bp View
LQ986677.1 emblrelpat Sequence 33 from Patent EP2573183. 11205 bp synthetic construct QL-ELE-00-012 82 bp View
LQ986677.1 emblrelpat Sequence 33 from Patent EP2573183. 11205 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.