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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LQ886172.1 emblrelpat Sequence 1 from Patent EP3372676. 2767 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903500.1 emblrelpat Sequence 24 from Patent WO2018172065. 11586 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903918.1 emblrelpat Sequence 30 from Patent EP3377615. 15463 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903919.1 emblrelpat Sequence 31 from Patent EP3377615. 15757 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903920.1 emblrelpat Sequence 32 from Patent EP3377615. 15355 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903921.1 emblrelpat Sequence 33 from Patent EP3377615. 15441 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903926.1 emblrelpat Sequence 38 from Patent EP3377615. 10693 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903927.1 emblrelpat Sequence 39 from Patent EP3377615. 10264 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903928.1 emblrelpat Sequence 40 from Patent EP3377615. 10692 bp synthetic construct QL-ELE-00-012 82 bp View
LQ903929.1 emblrelpat Sequence 41 from Patent EP3377615. 10262 bp synthetic construct QL-ELE-00-012 82 bp View
LQ909748.1 emblrelpat Sequence 24 from Patent EP3378485. 11586 bp synthetic construct QL-ELE-00-012 82 bp View
LQ912126.1 emblrelpat Sequence 2 from Patent WO2018172181. 6276 bp synthetic construct QL-ELE-00-012 82 bp View
LQ929714.1 emblrelpat Sequence 1 from Patent WO2018189764. 15521 bp synthetic construct QL-ELE-00-012 82 bp View
LQ929714.1 emblrelpat Sequence 1 from Patent WO2018189764. 15521 bp synthetic construct QL-ELE-00-012 82 bp View
LQ933354.1 emblrelpat Sequence 15 from Patent EP2779825. 342 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LQ933357.1 emblrelpat Sequence 18 from Patent EP2779825. 4683 bp synthetic construct QL-ELE-00-012 82 bp View
LQ936617.1 emblrelpat Sequence 644 from Patent EP2780458. 351 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LQ954979.1 emblrelpat Sequence 2 from Patent WO2014194190. 9191 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954980.1 emblrelpat Sequence 3 from Patent WO2014194190. 15005 bp synthetic construct QL-ELE-00-012 82 bp View
LQ954980.1 emblrelpat Sequence 3 from Patent WO2014194190. 15005 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.