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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LP775067.1 emblrelpat Sequence 57 from Patent WO2018022574. 15457 bp synthetic construct QL-ELE-00-012 82 bp View
LP775069.1 emblrelpat Sequence 59 from Patent WO2018022574. 12143 bp synthetic construct QL-ELE-00-012 82 bp View
LP775069.1 emblrelpat Sequence 59 from Patent WO2018022574. 12143 bp synthetic construct QL-ELE-00-012 82 bp View
LP775070.1 emblrelpat Sequence 60 from Patent WO2018022574. 12931 bp synthetic construct QL-ELE-00-012 82 bp View
LP775070.1 emblrelpat Sequence 60 from Patent WO2018022574. 12931 bp synthetic construct QL-ELE-00-012 82 bp View
LP789644.1 emblrelpat Sequence 4 from Patent WO2018054911. 16730 bp synthetic construct QL-ELE-00-012 82 bp View
LP789989.1 emblrelpat Sequence 37 from Patent EP3272211. 1666 bp synthetic construct QL-ELE-00-012 82 bp View
LP815412.1 emblrelpat Sequence 16 from Patent WO2018046526. 1119 bp Cauliflower mosaic virus QL-ELE-00-012 82 bp View
LP829389.1 emblrelpat Sequence 30 from Patent EP3301111. 8630 bp synthetic construct QL-ELE-00-012 82 bp View
LP892643.1 emblrelpat Sequence 2 from Patent EP3253879. 5713 bp synthetic construct QL-ELE-00-012 82 bp View
LP892643.1 emblrelpat Sequence 2 from Patent EP3253879. 5713 bp synthetic construct QL-ELE-00-012 82 bp View
LP928093.1 emblrelpat Sequence 19 from Patent EP3224363. 14400 bp synthetic construct QL-ELE-00-012 82 bp View
LP928128.1 emblrelpat Sequence 54 from Patent EP3224363. 5414 bp synthetic construct QL-ELE-00-012 82 bp View
LP928128.1 emblrelpat Sequence 54 from Patent EP3224363. 5414 bp synthetic construct QL-ELE-00-012 82 bp View
LP947167.1 emblrelpat Sequence 62 from Patent EP3228627. 2065 bp synthetic construct QL-ELE-00-012 82 bp View
LP947171.1 emblrelpat Sequence 66 from Patent EP3228627. 3058 bp synthetic construct QL-ELE-00-012 82 bp View
LP947173.1 emblrelpat Sequence 68 from Patent EP3228627. 3079 bp synthetic construct QL-ELE-00-012 82 bp View
LP947174.1 emblrelpat Sequence 69 from Patent EP3228627. 3067 bp synthetic construct QL-ELE-00-012 82 bp View
LP947176.1 emblrelpat Sequence 71 from Patent EP3228627. 3085 bp synthetic construct QL-ELE-00-012 82 bp View
LP947177.1 emblrelpat Sequence 72 from Patent EP3228627. 3088 bp synthetic construct QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.